(12 nodes) Inositol catabolic process network (Acidothermus cellulolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Acel_0369	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein. (338 aa)
	Acel_1814	Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; TrkA-N domain protein; Oxidoreductase, C-terminal domain; KEGG: sco:SCO6984 myo-inositol 2-dehydrogenase. (340 aa)
	Acel_1811	PFAM: oxidoreductase domain protein; KEGG: cgb:cg0211 putative oxidoreductase. (392 aa)
	iolG	Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). (341 aa)
	Acel_1805	Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sco:SCO6984 myo-inositol 2-dehydrogenase. (330 aa)
	Acel_1801	5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein. (314 aa)
	Acel_1937	PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase, C-terminal domain; KEGG: ret:RHE_CH01364 probable oxidoreductase protein. (387 aa)
	Acel_1800	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase. (626 aa)
	Acel_1532	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase. (312 aa)
	Acel_1454	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: nfa:nfa23680 putative oxidoreductase. (357 aa)
	Acel_0583	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative. (396 aa)
	Acel_0581	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like. (390 aa)

Your Current Organism:

Acidothermus cellulolyticus

NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acel_0369	Acel_1532	Acel_0369	Acel_1532	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase.	0.422
Acel_0369	Acel_1800	Acel_0369	Acel_1800	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	0.552
Acel_0369	Acel_1801	Acel_0369	Acel_1801	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.	5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein.	0.540
Acel_0581	Acel_1800	Acel_0581	Acel_1800	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like.	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	0.552
Acel_0581	Acel_1801	Acel_0581	Acel_1801	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like.	5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein.	0.540
Acel_0581	iolG	Acel_0581	Acel_1809	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like.	Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).	0.496
Acel_0583	Acel_1800	Acel_0583	Acel_1800	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative.	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	0.549
Acel_0583	Acel_1801	Acel_0583	Acel_1801	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative.	5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein.	0.537
Acel_1454	Acel_1800	Acel_1454	Acel_1800	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: nfa:nfa23680 putative oxidoreductase.	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	0.552
Acel_1454	Acel_1801	Acel_1454	Acel_1801	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: nfa:nfa23680 putative oxidoreductase.	5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein.	0.540
Acel_1454	iolG	Acel_1454	Acel_1809	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: nfa:nfa23680 putative oxidoreductase.	Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).	0.433
Acel_1532	Acel_0369	Acel_1532	Acel_0369	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase.	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.	0.422
Acel_1532	Acel_1800	Acel_1532	Acel_1800	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase.	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	0.552
Acel_1532	Acel_1801	Acel_1532	Acel_1801	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase.	5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein.	0.540
Acel_1532	Acel_1811	Acel_1532	Acel_1811	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase.	PFAM: oxidoreductase domain protein; KEGG: cgb:cg0211 putative oxidoreductase.	0.413
Acel_1532	iolG	Acel_1532	Acel_1809	PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase.	Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).	0.610
Acel_1800	Acel_0369	Acel_1800	Acel_0369	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.	0.552
Acel_1800	Acel_0581	Acel_1800	Acel_0581	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: jan:Jann_1461 oxidoreductase-like.	0.552
Acel_1800	Acel_0583	Acel_1800	Acel_0583	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3008 dehydrogenase, putative.	0.549
Acel_1800	Acel_1454	Acel_1800	Acel_1454	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: nfa:nfa23680 putative oxidoreductase.	0.552

page 1 of 4

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Databases

Cooccurrence

Textmining

Coexpression

Experiments

Fusion

© STRING Consortium 2025

Credits

Access

Info

About