STRINGSTRING
atpG atpG atpD atpD atpC atpC gatA gatA Acel_0727 Acel_0727 clpX clpX Acel_0745 Acel_0745 Acel_0746 Acel_0746 Acel_0773 Acel_0773 Acel_0775 Acel_0775 Acel_2083 Acel_2083 dnaG dnaG Acel_0811 Acel_0811 Acel_0812 Acel_0812 Acel_0820 Acel_0820 Acel_0844 Acel_0844 Acel_0874 Acel_0874 Acel_0935 Acel_0935 Acel_0968 Acel_0968 Acel_1021 Acel_1021 Acel_1048 Acel_1048 Acel_1056 Acel_1056 uvrB uvrB uvrA uvrA uvrC uvrC Acel_1154 Acel_1154 Acel_1167 Acel_1167 Acel_1171 Acel_1171 Acel_1182 Acel_1182 arc arc prcB prcB prcA prcA tatA tatA tatC tatC gcvP gcvP gcvH gcvH ribH ribH potA potA priA priA Acel_1291 Acel_1291 rpoZ rpoZ carA carA Acel_1333 Acel_1333 ruvB ruvB ruvA ruvA pdxT pdxT Acel_1368 Acel_1368 Acel_1441 Acel_1441 Acel_1442 Acel_1442 Acel_1443 Acel_1443 Acel_1462 Acel_1462 dxr dxr rpsB rpsB ffh ffh rpmF rpmF gpsA gpsA leuD leuD Acel_1617 Acel_1617 cysD cysD cysC cysC moaA moaA Acel_1650 Acel_1650 Acel_1688 Acel_1688 Acel_1725 Acel_1725 Acel_1746 Acel_1746 Acel_1771 Acel_1771 Acel_1775 Acel_1775 Acel_1776 Acel_1776 Acel_1784 Acel_1784 Acel_1788 Acel_1788 Acel_1800 Acel_1800 xseA xseA xseB xseB fumC fumC eno eno Acel_1930 Acel_1930 Acel_1970 Acel_1970 dnaX dnaX Acel_2024 Acel_2024 Acel_2038 Acel_2038 Acel_0002 Acel_0002 Acel_0029 Acel_0029 gpmA gpmA Acel_0091 Acel_0091 pdxH pdxH Acel_0139 Acel_0139 Acel_0188 Acel_0188 Acel_0193 Acel_0193 Acel_0271 Acel_0271 Acel_0272 Acel_0272 Acel_0273 Acel_0273 Acel_0279 Acel_0279 rplA rplA rplJ rplJ rpoB rpoB rpoC rpoC rpsL rpsL rpsG rpsG rplB rplB rpsS rpsS rplV rplV rplN rplN rpsE rpsE rpmD rpmD rplO rplO rpsD rpsD rpoA rpoA Acel_0340 Acel_0340 Acel_0367 Acel_0367 Acel_0375 Acel_0375 sucD sucD Acel_0398 Acel_0398 Acel_2041 Acel_2041 Acel_2043 Acel_2043 Acel_2085 Acel_2085 Acel_2088 Acel_2088 Acel_2089 Acel_2089 Acel_2102 Acel_2102 dcd dcd Acel_2055 Acel_2055 Acel_2063 Acel_2063 Acel_0403 Acel_0403 Acel_0506 Acel_0506 Acel_0508 Acel_0508 Acel_0509 Acel_0509 Acel_0558 Acel_0558 Acel_0586 Acel_0586 Acel_0599 Acel_0599 Acel_0600 Acel_0600 Acel_0601 Acel_0601 atpB atpB atpE atpE atpF atpF atpH atpH atpA atpA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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atpGATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (300 aa)
atpDATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (490 aa)
atpCATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (125 aa)
gatAaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (505 aa)
Acel_0727PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: ade:Adeh_3660 NADH ubiquinone oxidoreductase, 20 kDa subunit. (269 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (427 aa)
Acel_0745PFAM: ABC-2 type transporter; KEGG: mta:Moth_0875 ABC-2. (278 aa)
Acel_0746PFAM: ABC-2 type transporter; KEGG: mta:Moth_0875 ABC-2. (269 aa)
Acel_0773PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: nfa:nfa13820 putative DNA-binding protein. (250 aa)
Acel_0775TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: tfu:Tfu_0823 DNA polymerase III, delta subunit. (342 aa)
Acel_2083Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (452 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (655 aa)
Acel_0811KEGG: noc:Noc_0055 hypothetical protein. (158 aa)
Acel_0812KEGG: noc:Noc_0056 hypothetical protein. (1243 aa)
Acel_0820PFAM: metallophosphoesterase; KEGG: plt:Plut_0994 DNA repair exonuclease. (445 aa)
Acel_0844Type III secretion system ATPase, FliI/YscN; KEGG: lxx:Lxx06360 flagellum-like ATP synthase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase. (439 aa)
Acel_0874Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: fra:Francci3_3485 propionyl-CoA carboxylase. (474 aa)
Acel_09352-oxoglutarate dehydrogenase E2 component; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: fra:Francci3_3135 dehydrogenase subunit. (476 aa)
Acel_0968KEGG: fra:Francci3_3104 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC, C subunit domain protein; Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease. (566 aa)
Acel_1021Hypothetical protein; KEGG: dvu:DVU2292 hydrogenase nickel insertion protein HypA. (94 aa)
Acel_1048PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pac:PPA0693 dihydrolipoamide acyltransferase. (76 aa)
Acel_1056PFAM: ABC-2 type transporter; KEGG: sco:SCO2060 putative integral membrane transport protein. (270 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (705 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (947 aa)
uvrCExcinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (641 aa)
Acel_1154PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpa:MAP3089c putative iron transport system ATP-binding protein. (286 aa)
Acel_1167KEGG: sma:SAV6639 hypothetical protein. (383 aa)
Acel_1171KEGG: sma:SAV6646 hypothetical protein. (239 aa)
Acel_1182tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (293 aa)
arcVesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (583 aa)
prcBProteasome endopeptidase complex, beta component; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (290 aa)
prcA20S proteasome, A and B subunits; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (234 aa)
tatASec-independent translocation protein mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (142 aa)
tatCSec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (278 aa)
gcvPGlycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (964 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (130 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (165 aa)
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (383 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (699 aa)
Acel_1291Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (415 aa)
rpoZDNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (87 aa)
carAKEGG: sma:SAV6866 putative carbamoyl-phosphate synthase subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; Belongs to the CarA family. (395 aa)
Acel_1333Recombination protein MgsA; PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: sma:SAV6846 putative ATP/GTP-binding protein. (500 aa)
ruvBHolliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (367 aa)
ruvAHolliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (196 aa)
pdxTPyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (207 aa)
Acel_1368PFAM: ABC-2 type transporter; KEGG: sco:SCO3338 putative integral membrane protein. (289 aa)
Acel_1441TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rpb:RPB_3639 phenylacetate-CoA oxygenase, PaaI subunit. (252 aa)
Acel_1442TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: sma:SAV4353 putative phenylacetic acid degradation protein. (97 aa)
Acel_1443TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: sma:SAV4354 putative phenylacetic acid degradation protein. (320 aa)
Acel_1462KEGG: tfu:Tfu_1750 hypothetical protein. (408 aa)
dxr1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (421 aa)
rpsBPFAM: ribosomal protein S2; KEGG: tfu:Tfu_0676 ribosomal protein S2, bacterial and organelle form; Belongs to the universal ribosomal protein uS2 family. (275 aa)
ffhSignal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (551 aa)
rpmFTIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: nfa:nfa41850 putative ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (59 aa)
gpsAPFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: sma:SAV2680 putative glycerol-3-phosphate dehydrogenase, NAD(P)H-dependent. (365 aa)
leuD3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (197 aa)
Acel_1617Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (431 aa)
cysDTIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: sma:SAV2313 putative sulfate adenylyltransferase subunit 2. (328 aa)
cysCAdenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. (229 aa)
moaAGTP cyclohydrolase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (362 aa)
Acel_1650PFAM: protein of unknown function DUF156; KEGG: nfa:nfa8420 hypothetical protein. (93 aa)
Acel_1688Molybdopterin synthase subunit MoaD; PFAM: thiamineS protein; KEGG: tfu:Tfu_2369 hypothetical protein. (90 aa)
Acel_1725Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (348 aa)
Acel_1746Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: fra:Francci3_0863 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (704 aa)
Acel_1771ATP-dependent DNA helicase, Rep family; PFAM: UvrD/REP helicase; KEGG: fra:Francci3_3792 UvrD/REP helicase. (508 aa)
Acel_1775PFAM: UvrD/REP helicase; KEGG: tfu:Tfu_0524 putative DNA helicase; Belongs to the helicase family. UvrD subfamily. (1164 aa)
Acel_1776PFAM: UvrD/REP helicase; SMART: AAA ATPase; KEGG: tfu:Tfu_0523 putative ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. (1095 aa)
Acel_1784KEGG: sma:SAV3097 hypothetical protein. (224 aa)
Acel_1788PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_3801 MCP methyltransferase, CheR-type. (316 aa)
Acel_18003D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase. (626 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (416 aa)
xseBExodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (96 aa)
fumCFumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (472 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (429 aa)
Acel_1930PFAM: ABC-2 type transporter; KEGG: sso:SSO2646 hypothetical protein. (282 aa)
Acel_1970KEGG: tfu:Tfu_2782 DNA polymerase III delta prime subunit; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: AAA ATPase. (442 aa)
dnaXDNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (637 aa)
Acel_2024PFAM: thiamineS protein; KEGG: fra:Francci3_0445 thiamine S. (92 aa)
Acel_2038PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: sma:SAV1721 putative ABC transporter ATP-binding protein. (384 aa)
Acel_0002DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (387 aa)
Acel_0029PFAM: FAD dependent oxidoreductase; KEGG: sco:SCO1661 putative glycerol-3-phosphate dehydrogenase. (555 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (252 aa)
Acel_0091Phosphate ABC transporter substrate-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (391 aa)
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (224 aa)
Acel_0139PFAM: Amylo-alpha-1,6-glucosidase; KEGG: tfu:Tfu_2979 hypothetical protein. (733 aa)
Acel_0188PFAM: iron permease FTR1; KEGG: mpa:MAP1762c high-affinity iron transporter. (283 aa)
Acel_0193PFAM: ABC-2 type transporter; KEGG: sco:SCO5130 putative ABC transporter integral membrane protein. (241 aa)
Acel_0271TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: sco:SCO4566 NADH dehydrogenase I chain E. (269 aa)
Acel_0272NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (434 aa)
Acel_0273NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (830 aa)
Acel_0279NADH dehydrogenase subunit M; KEGG: tfu:Tfu_2683 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (507 aa)
rplALSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (239 aa)
rplJLSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1169 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1304 aa)
rpsLSSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. (124 aa)
rpsGSSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rplBLSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa)
rpsSSSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rplVLSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (281 aa)
rplNLSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsESSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (199 aa)
rpmDPFAM: ribosomal protein L30; KEGG: fra:Francci3_0600 ribosomal protein L30. (60 aa)
rplOLSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (164 aa)
rpsDSSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (341 aa)
Acel_0340PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 ABC-2. (273 aa)
Acel_0367TIGRFAM: IMP dehydrogenase family protein; KEGG: tfu:Tfu_2595 IMP dehydrogenase related 2. (369 aa)
Acel_0375TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: sco:SCO4797 putative ATP-dependent DNA helicase II. (763 aa)
sucDsuccinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
Acel_0398KEGG: sma:SAV3330 biotin apo-protein ligase; TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase. (341 aa)
Acel_2041TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; TOBE domain protein; KEGG: nfa:nfa43270 putative transporter. (132 aa)
Acel_2043Hypothetical protein. (108 aa)
Acel_2085Zinc uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sma:SAV5631 putative metal uptake regulation protein; Belongs to the Fur family. (138 aa)
Acel_2088PFAM: ABC-3 protein; KEGG: fra:Francci3_2477 ABC-3. (278 aa)
Acel_2089PFAM: ABC-3 protein; KEGG: fra:Francci3_2476 ABC-3. (287 aa)
Acel_2102KEGG: tfu:Tfu_0071 hypothetical protein. (176 aa)
dcddCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. (191 aa)
Acel_2055PFAM: thiamineS protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pai:PAE2577 ferredoxin-nitrite reductase. (639 aa)
Acel_2063PFAM: MT-A70 family protein; KEGG: nmu:Nmul_A2608 MT-A70; Belongs to the MT-A70-like family. (211 aa)
Acel_0403Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: gka:GK1603 propionyl-CoA carboxylase. (510 aa)
Acel_0506TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: sco:SCO0219 putative nitrate reductase delta chain NarI2. (250 aa)
Acel_0508TIGRFAM: nitrate reductase, beta subunit; KEGG: sco:SCO0217 nitrate reductase beta chain NarH2. (549 aa)
Acel_0509PFAM: molydopterin dinucleotide-binding region; KEGG: sco:SCO0216 nitrate reductase alpha chain NarG2; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (628 aa)
Acel_0558Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sma:SAV3962 putative ABC transporter ATP-binding protein; TC 3.A.1.1.-. (360 aa)
Acel_0586TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: tfu:Tfu_0566 2-oxoglutarate dehydrogenase, E1 component. (1233 aa)
Acel_0599TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mta:Moth_2096 cytochrome d ubiquinol oxidase, subunit II. (348 aa)
Acel_0600PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: tfu:Tfu_0638 putative cytochrome oxidase subunit I. (459 aa)
Acel_0601PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: fra:Francci3_3829 twin-arginine translocation protein TatB. (119 aa)
atpBATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (271 aa)
atpEATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (87 aa)
atpFATP synthase F0 subcomplex B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (191 aa)
atpHATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (274 aa)
atpAATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (554 aa)
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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