STRINGSTRING
Acel_0723 Acel_0723 Acel_0266 Acel_0266 Acel_1638 Acel_1638 murB murB Acel_1470 Acel_1470
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Acel_0723PFAM: FAD linked oxidase domain protein; KEGG: sma:SAV2090 putative xylitol oxidase. (417 aa)
Acel_0266TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; Lycopene beta and epsilon cyclase; KEGG: fra:Francci3_0537 geranylgeranyl reductase. (445 aa)
Acel_1638Carbon-monoxide dehydrogenase (acceptor); PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: ape:APE2219 292aa long hypothetical nicotine dehydrogenase chain A. (295 aa)
murBUDP-N-acetylmuramate dehydrogenase; Cell wall formation. (341 aa)
Acel_1470FAD linked oxidase domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: fra:Francci3_0962 D-lactate dehydrogenase (cytochrome). (997 aa)
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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