STRINGSTRING
hpaA hpaA hpaX hpaX hpaI hpaI hpaH hpaH gabD gabD hpaF hpaF hpaD hpaD hpaE hpaE hpaG2 hpaG2 hpaG1 hpaG1 hpaR hpaR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hpaARegulator of the 4HPA-hydroxylase operon; Function of strongly homologous gene; regulator. (302 aa)
hpaXTransporter HpaX; Function of strongly homologous gene; transporter. (457 aa)
hpaI4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the HpcH/HpaI aldolase family. (255 aa)
hpaH2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (267 aa)
gabDSuccinate-semialdehyde dehydrogenase, NADP-dependent; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family. (495 aa)
hpaF5-carboxymethyl-2-hydroxymuconate Delta-isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (137 aa)
hpaD3,4-dihydroxyphenylacetate 2,3-dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (293 aa)
hpaE5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family. (488 aa)
hpaG2HpaG2 protein, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase component; Function of strongly homologous gene; enzyme. (254 aa)
hpaG1HpaG1 protein, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase component; Function of strongly homologous gene; enzyme. (210 aa)
hpaRHomoprotocatechuate degradative operon repressor; Function of strongly homologous gene; regulator. (149 aa)
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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