STRINGSTRING
XDD1_2711 XDD1_2711 XDD1_2680 XDD1_2680 fabB fabB fadI fadI fabH fabH fabF fabF xcnL xcnL xcnH xcnH xcnF xcnF XDD1_1655 XDD1_1655 XDD1_0688 XDD1_0688 paaJ paaJ XDD1_3475 XDD1_3475 XDD1_3472 XDD1_3472 fadA fadA XDD1_2715 XDD1_2715
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XDD1_2711Putative polyketide synthase type I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1670 aa)
XDD1_26803-oxoacyl-[acyl-carrier-protein] synthase. (330 aa)
fabB3-oxoacyl-[acyl-carrier-protein] synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (404 aa)
fadI3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (436 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (317 aa)
fabF3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (413 aa)
xcnLPolyketide synthase involved in xenocoumacin synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (1487 aa)
xcnHPolyketide synthase involved in xenocoumacin synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (1926 aa)
xcnFPolyketide synthase involved in xenocoumacin synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (3416 aa)
XDD1_1655Acetyl-CoA C-acyltransferase (fragment). (89 aa)
XDD1_0688Putative 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (332 aa)
paaJProtein PaaJ; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
XDD1_3475Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (419 aa)
XDD1_3472Beta-ketoacyl synthase; Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (391 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)
XDD1_2715Polyketide synthase modules and related protein; Function of strongly homologous gene; enzyme. (2211 aa)
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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