(14 nodes) Mixed, incl. Ligand-gated channel activity, and ABC-type amino acid transporter activity network (Xenorhabdus griffiniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KLU17288.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	KLU17289.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	KLU17290.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	artM	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	KLU16597.1	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	KLU16598.1	Arginine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	KLU16599.1	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	artP	Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
	KLU15734.1	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	KLU15735.1	Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	KLU15494.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	KLU15495.1	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
	KLU15496.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	KLU15497.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)

Your Current Organism:

Xenorhabdus griffiniae

NCBI taxonomy Id: 351672
Other names: CIP 109073, DSM 17911, X. griffiniae, Xenorhabdus griffiniae Tailliez et al. 2006, Xenorhabdus sp. ID10, strain ID10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KLU15494.1	KLU15495.1	AAY47_10395	AAY47_10400	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KLU15494.1	KLU15496.1	AAY47_10395	AAY47_10405	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KLU15494.1	KLU15497.1	AAY47_10395	AAY47_10410	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
KLU15494.1	KLU15734.1	AAY47_10395	AAY47_09395	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KLU15494.1	KLU15735.1	AAY47_10395	AAY47_09400	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
KLU15494.1	KLU16597.1	AAY47_10395	AAY47_05040	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
KLU15494.1	KLU16599.1	AAY47_10395	AAY47_05050	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
KLU15494.1	KLU17289.1	AAY47_10395	AAY47_01185	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
KLU15494.1	KLU17290.1	AAY47_10395	AAY47_01190	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KLU15494.1	artM	AAY47_10395	AAY47_05035	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
KLU15494.1	artP	AAY47_10395	AAY47_09390	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
KLU15495.1	KLU15494.1	AAY47_10400	AAY47_10395	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KLU15495.1	KLU15496.1	AAY47_10400	AAY47_10405	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KLU15495.1	KLU15497.1	AAY47_10400	AAY47_10410	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KLU15495.1	KLU15734.1	AAY47_10400	AAY47_09395	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
KLU15495.1	KLU15735.1	AAY47_10400	AAY47_09400	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
KLU15495.1	KLU16597.1	AAY47_10400	AAY47_05040	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
KLU15495.1	KLU16598.1	AAY47_10400	AAY47_05045	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KLU15495.1	KLU16599.1	AAY47_10400	AAY47_05050	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
KLU15495.1	KLU17288.1	AAY47_10400	AAY47_01180	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955