STRINGSTRING
AOM42760.1 AOM42760.1 AOM39291.1 AOM39291.1 AOM39293.1 AOM39293.1 AOM39590.1 AOM39590.1 AOM42796.1 AOM42796.1 rssB rssB AOM40275.1 AOM40275.1 AOM40276.1 AOM40276.1 AOM40277.1 AOM40277.1 AOM40278.1 AOM40278.1 AOM40279.1 AOM40279.1 AOM40280.1 AOM40280.1 AOM40281.1 AOM40281.1 AOM40446.1 AOM40446.1 AOM42833.1 AOM42833.1 rcsC rcsC rcsB rcsB rcsD rcsD AOM41135.1 AOM41135.1 AOM41136.1 AOM41136.1 phoR phoR AOM41189.1 AOM41189.1 AOM41221.1 AOM41221.1 AOM41722.1 AOM41722.1 AOM41723.1 AOM41723.1 AOM41911.1 AOM41911.1 AOM41912.1 AOM41912.1 ntrC ntrC AOM41928.1 AOM41928.1 AOM42148.1 AOM42148.1 AOM42171.1 AOM42171.1 glnD glnD AOM42552.1 AOM42552.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOM42760.1Two-component sensor histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
AOM39291.1Two-component system response regulator GlrR; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
AOM39293.1Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
AOM39590.1Two-component system response regulator UvrY; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
AOM42796.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)
rssBResponse regulator of RpoS; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. (341 aa)
AOM40275.1DNA-binding transcriptional regulator TyrR; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
AOM40276.1TIGR01620 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
AOM40277.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
AOM40278.1DNA-binding transcriptional activator PspC; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
AOM40279.1Phage shock protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)
AOM40280.1Phage shock protein PspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
AOM40281.1Phage shock protein operon transcriptional activator; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
AOM40446.1Response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
AOM42833.1Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
rcsCTwo-component system sensor histidine kinase/response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (939 aa)
rcsBDNA-binding response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. (216 aa)
rcsDPhosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (907 aa)
AOM41135.1Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
AOM41136.1Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
phoRMembrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
AOM41189.1Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AOM41221.1Two-component system response regulator ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
AOM41722.1Response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
AOM41723.1Two-component system sensor histidine kinase CpxA; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
AOM41911.1Two-component system response regulator OmpR; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
AOM41912.1EnvZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
ntrCNitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (476 aa)
AOM41928.1Two-component system sensor histidine kinase NtrB; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
AOM42148.1RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (477 aa)
AOM42171.1Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology. (765 aa)
glnD[protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (884 aa)
AOM42552.1Two-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
Your Current Organism:
Xenorhabdus hominickii
NCBI taxonomy Id: 351679
Other names: CIP 109072, DSM 17903, X. hominickii, Xenorhabdus hominickii Taillez et al. 2006, Xenorhabdus sp. KE01, Xenorhabdus sp. KR01, Xenorhabdus sp. KR05, strain KE01
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