STRINGSTRING
parE parE AOM42760.1 AOM42760.1 gyrB gyrB AOM41723.1 AOM41723.1 phoR phoR htpG htpG AOM40835.1 AOM40835.1 rcsD rcsD rcsC rcsC AOM42833.1 AOM42833.1 AOM40373.1 AOM40373.1 AOM39738.1 AOM39738.1 motB motB AOM39385.1 AOM39385.1 AOM42552.1 AOM42552.1 AOM42526.1 AOM42526.1 AOM42171.1 AOM42171.1 AOM41928.1 AOM41928.1 AOM41912.1 AOM41912.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (631 aa)
AOM42760.1Two-component sensor histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (804 aa)
AOM41723.1Two-component system sensor histidine kinase CpxA; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
phoRMembrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
htpGMolecular chaperone HtpG; Molecular chaperone. Has ATPase activity. (629 aa)
AOM40835.1Two-component system sensor histidine kinase KdbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (904 aa)
rcsDPhosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (907 aa)
rcsCTwo-component system sensor histidine kinase/response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (939 aa)
AOM42833.1Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
AOM40373.1Two-component system sensor histidine kinase UhpB; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
AOM39738.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
motBFlagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (717 aa)
AOM39385.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
AOM42552.1Two-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
AOM42526.1MASE1 sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
AOM42171.1Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology. (765 aa)
AOM41928.1Two-component system sensor histidine kinase NtrB; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
AOM41912.1EnvZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
Your Current Organism:
Xenorhabdus hominickii
NCBI taxonomy Id: 351679
Other names: CIP 109072, DSM 17903, X. hominickii, Xenorhabdus hominickii Taillez et al. 2006, Xenorhabdus sp. KE01, Xenorhabdus sp. KR01, Xenorhabdus sp. KR05, strain KE01
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