STRINGSTRING
cgd7_3970 cgd7_3970 cgd1_2690 cgd1_2690 cgd1_2910 cgd1_2910 cgd4_1660 cgd4_1660 cgd4_3190 cgd4_3190 cgd5_2220 cgd5_2220 cgd1_2250 cgd1_2250
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cgd7_3970Small nuclear ribonucleoprotein, putative. (62 aa)
cgd1_2690Sm domain-containing protein. (67 aa)
cgd1_2910Sm domain-containing protein. (139 aa)
cgd4_1660Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
cgd4_3190Small nuclear ribonucleoprotein Sm D2. (106 aa)
cgd5_2220Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (137 aa)
cgd1_2250Small nuclear ribonucleoprotein Sm D3. (143 aa)
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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