STRINGSTRING
cgd3_3690 cgd3_3690 cgd4_3140 cgd4_3140 cgd5_920 cgd5_920 cgd3_3880 cgd3_3880 cgd3_2890 cgd3_2890
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cgd3_3690U5 snRNP 100 kD protein, putative; Belongs to the DEAD box helicase family. (529 aa)
cgd4_3140WD repeat protein. (343 aa)
cgd5_920Pre-mRNA splicing factor Pro1/Prp6. HAT repeat protein. (923 aa)
cgd3_3880Snu114p GTpase, U5 snRNP-specific protein, 116 kDa. (1035 aa)
cgd3_2890Prp8. JAB/PAD domain. (2379 aa)
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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