STRINGSTRING
cgd1_560 cgd1_560 cgd6_3810 cgd6_3810 cgd8_1690 cgd8_1690 cgd8_2040 cgd8_2040 cgd1_1840 cgd1_1840 cgd5_2320 cgd5_2320 cgd5_1740 cgd5_1740 cgd5_3790 cgd5_3790 cgd5_4440 cgd5_4440 cgd4_4360 cgd4_4360 cgd1_1320 cgd1_1320
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cgd1_560Uncharacterized protein. (312 aa)
cgd6_3810Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (277 aa)
cgd8_1690Uncharacterized protein. (109 aa)
cgd8_2040POZ domain protein, related to tetramerization domain of K channel. (242 aa)
cgd1_1840Uncharacterized protein. (932 aa)
cgd5_2320Prohibitin. (284 aa)
cgd5_1740Conserved protein, possible U4/U6 associated RNA splicing factor. (452 aa)
cgd5_3790SNF7 ortholog. (205 aa)
cgd5_4440Thymidine kinase. (202 aa)
cgd4_4360Ring finger domain containing protein. (657 aa)
cgd1_1320Developmental protein, putative. (188 aa)
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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