(33 nodes) Mitotic Prometaphase network (Cryptosporidium parvum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cgd3_120	Uncharacterized protein. (228 aa)
	cgd7_290	RAD21-N-terminal like protein. (646 aa)
	cgd7_590	Ser/Thr protein kinase. (228 aa)
	cgd7_810	Serine/threonine-protein phosphatase. (322 aa)
	cgd7_1850	SMC4'SMC4, chromosomal ATpase with giant coiled coil regions. (1366 aa)
	cgd7_1980	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (492 aa)
	cgd7_2700	SMC3'SMC type chromosomal ABC ATpase. (1304 aa)
	cgd7_3060	Spindle pole body component. (983 aa)
	cgd7_4390	NudC ortholog. (312 aa)
	cgd6_2930	Protein with possible stromal antigen (SA/STAG) domain. (1404 aa)
	cgd6_3410	Spindle pole body component. (928 aa)
	cgd4_4280	Spindle pole body component. (311 aa)
	cgd6_4140	Coiled coil protein. (696 aa)
	cgd6_4260	Low complexity protein. (243 aa)
	cgd6_4760	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (445 aa)
	cgd8_1690	Uncharacterized protein. (109 aa)
	cgd3_1850	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (338 aa)
	cgd3_2960	Uncharacterized protein. (2691 aa)
	cgd3_3670	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (252 aa)
	cgd3_3860	Coiled coil protein. (493 aa)
	cgd2_2750	Structural maintenance of chromosomes protein. (1349 aa)
	cgd1_3370	CS domain-containing protein. (211 aa)
	cgd5_1680	Protein with an N-terminal domain shared with the TOG/ALp4p ike microtubule associated proteins. (1359 aa)
	cgd5_2600	Putative leucine aminopeptidase of possible plant or bacterial origin. (550 aa)
	cgd4_1710	Low complexity protein. (1466 aa)
	cgd4_290	Uncharacterized protein. (691 aa)
	cgd7_1320	Casein kinase II, alpha subunit, putative. (520 aa)
	cgd6_620	Casein kinase II, alpha subunit, putative; Belongs to the protein kinase superfamily. (341 aa)
	cgd3_3960	Uncharacterized protein. (838 aa)
	cgd5_230	Uncharacterized protein. (464 aa)
	cgd5_3000	Uncharacterized protein. (95 aa)
	cgd4_2200	Structural maintenance of chromosomes protein. (1236 aa)
	cgd5_4070	Serine/threonine-protein phosphatase. (239 aa)

Your Current Organism:

Cryptosporidium parvum

NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cgd1_3370	cgd3_120	Q5CSB6	Q5CPG7	CS domain-containing protein.	Uncharacterized protein.	0.429
cgd1_3370	cgd3_3860	Q5CSB6	Q5CU82	CS domain-containing protein.	Coiled coil protein.	0.411
cgd1_3370	cgd5_230	Q5CSB6	A3FQG4	CS domain-containing protein.	Uncharacterized protein.	0.567
cgd1_3370	cgd5_4070	Q5CSB6	A3FQP4	CS domain-containing protein.	Serine/threonine-protein phosphatase.	0.424
cgd1_3370	cgd6_4140	Q5CSB6	Q5CWQ6	CS domain-containing protein.	Coiled coil protein.	0.436
cgd1_3370	cgd6_4760	Q5CSB6	Q5CWK1	CS domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.416
cgd1_3370	cgd7_810	Q5CSB6	Q5CYW0	CS domain-containing protein.	Serine/threonine-protein phosphatase.	0.424
cgd2_2750	cgd3_3960	Q5CTJ4	A3FQ50	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.910
cgd2_2750	cgd4_1710	Q5CTJ4	Q5CR86	Structural maintenance of chromosomes protein.	Low complexity protein.	0.951
cgd2_2750	cgd4_2200	Q5CTJ4	A3FQK9	Structural maintenance of chromosomes protein.	Structural maintenance of chromosomes protein.	0.777
cgd2_2750	cgd5_1680	Q5CTJ4	Q5CRS4	Structural maintenance of chromosomes protein.	Protein with an N-terminal domain shared with the TOG/ALp4p ike microtubule associated proteins.	0.545
cgd2_2750	cgd6_2930	Q5CTJ4	Q5CX13	Structural maintenance of chromosomes protein.	Protein with possible stromal antigen (SA/STAG) domain.	0.999
cgd2_2750	cgd6_4140	Q5CTJ4	Q5CWQ6	Structural maintenance of chromosomes protein.	Coiled coil protein.	0.829
cgd2_2750	cgd6_620	Q5CTJ4	A3FPS3	Structural maintenance of chromosomes protein.	Casein kinase II, alpha subunit, putative; Belongs to the protein kinase superfamily.	0.464
cgd2_2750	cgd7_1320	Q5CTJ4	A3FPM8	Structural maintenance of chromosomes protein.	Casein kinase II, alpha subunit, putative.	0.464
cgd2_2750	cgd7_1850	Q5CTJ4	Q5CYL8	Structural maintenance of chromosomes protein.	SMC4'SMC4, chromosomal ATpase with giant coiled coil regions.	0.802
cgd2_2750	cgd7_2700	Q5CTJ4	Q5CYE0	Structural maintenance of chromosomes protein.	SMC3'SMC type chromosomal ABC ATpase.	0.999
cgd2_2750	cgd7_290	Q5CTJ4	Q5CZ09	Structural maintenance of chromosomes protein.	RAD21-N-terminal like protein.	0.999
cgd3_120	cgd1_3370	Q5CPG7	Q5CSB6	Uncharacterized protein.	CS domain-containing protein.	0.429
cgd3_120	cgd3_2960	Q5CPG7	Q5CUG1	Uncharacterized protein.	Uncharacterized protein.	0.406