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cgd6_3490 cgd6_3490 cgd7_5490 cgd7_5490 cgd7_5380 cgd7_5380 LSM8 LSM8 cgd7_5320 cgd7_5320 cgd6_3430 cgd6_3430 cgd6_3300 cgd6_3300 cgd6_2830 cgd6_2830 cgd6_2560 cgd6_2560 cgd6_2550 cgd6_2550 cgd6_1770 cgd6_1770 cgd5_2880 cgd5_2880 cgd5_2960 cgd5_2960 cgd5_3280 cgd5_3280 cgd4_1570 cgd4_1570 cgd4_3140 cgd4_3140 cgd4_150 cgd4_150 cgd4_270 cgd4_270 cgd4_460 cgd4_460 cgd4_820 cgd4_820 Pap1p Pap1p cgd4_1090 cgd4_1090 Ms15p Ms15p cgd5_4060 cgd5_4060 cgd8_460 cgd8_460 cgd4_4230 cgd4_4230 cgd5_3800 cgd5_3800 cgd4_890 cgd4_890 cgd4_3260 cgd4_3260 cgd4_3190 cgd4_3190 cgd4_1660 cgd4_1660 cgd5_2980 cgd5_2980 cgd5_2970 cgd5_2970 cgd5_1130 cgd5_1130 cgd1_3470 cgd1_3470 cgd1_2950 cgd1_2950 cgd1_2910 cgd1_2910 cgd1_2690 cgd1_2690 cgd1_2650 cgd1_2650 cgd7_5160 cgd7_5160 cgd7_4770 cgd7_4770 cgd7_4600 cgd7_4600 cgd7_3720 cgd7_3720 cgd7_3690 cgd7_3690 cgd7_3230 cgd7_3230 cgd7_2890 cgd7_2890 cgd7_2740 cgd7_2740 cgd7_2530 cgd7_2530 cgd7_2160 cgd7_2160 cgd7_1180 cgd7_1180 cgd7_1110 cgd7_1110 cgd7_1020 cgd7_1020 cgd7_970 cgd7_970 cgd7_640 cgd7_640 cgd7_520 cgd7_520 cgd7_310 cgd7_310 cgd6_990 cgd6_990 cgd6_1540 cgd6_1540 cgd6_580 cgd6_580 cgd6_410 cgd6_410 cgd6_400 cgd6_400 cgd1_1800 cgd1_1800 cgd1_860 cgd1_860 cgd2_2970 cgd2_2970 cgd2_1660 cgd2_1660 cgd3_3690 cgd3_3690 cgd3_2310 cgd3_2310 cgd8_5180 cgd8_5180 cgd8_2350 cgd8_2350 cgd6_4610 cgd6_4610 cgd6_2400 cgd6_2400 cgd6_2150 cgd6_2150 cgd7_4370 cgd7_4370 cgd7_3970 cgd7_3970 cgd7_3960 cgd7_3960 cgd7_3240 cgd7_3240 cgd7_1750 cgd7_1750 cgd6_3810 cgd6_3810 cgd6_4370 cgd6_4370 cgd6_4490 cgd6_4490 cgd6_4670 cgd6_4670 cgd6_4750 cgd6_4750 cgd6_4850 cgd6_4850 cgd8_800 cgd8_800 cgd8_1480 cgd8_1480 cgd8_1560 cgd8_1560 cgd8_1950 cgd8_1950 cgd8_2340 cgd8_2340 cgd8_2520 cgd8_2520 cgd8_2650 cgd8_2650 cgd8_2960 cgd8_2960 cgd8_3340 cgd8_3340 cgd8_3370 cgd8_3370 cgd8_3690 cgd8_3690 cgd8_3900 cgd8_3900 cgd8_4080 cgd8_4080 cgd8_4100 cgd8_4100 cgd8_4240 cgd8_4240 cgd8_4380 cgd8_4380 cgd8_4520 cgd8_4520 cgd8_4770 cgd8_4770 cgd8_5130 cgd8_5130 cgd8_5240 cgd8_5240 cgd3_1060 cgd3_1060 cgd3_1440 cgd3_1440 cgd3_1870 cgd3_1870 cgd3_1880 cgd3_1880 cgd3_1920 cgd3_1920 cgd3_2230 cgd3_2230 cgd3_2360 cgd3_2360 cgd3_2620 cgd3_2620 cgd3_2880 cgd3_2880 cgd3_2890 cgd3_2890 cgd3_3070 cgd3_3070 cgd3_3880 cgd3_3880 cgd3_4320 cgd3_4320 cgd2_980 cgd2_980 cgd2_1410 cgd2_1410 cgd2_1480 cgd2_1480 cgd2_2810 cgd2_2810 cgd2_3510 cgd2_3510 cgd2_4250 cgd2_4250 cgd1_1310 cgd1_1310 cgd1_2250 cgd1_2250 cgd1_2260 cgd1_2260 cgd1_2710 cgd1_2710 cgd1_2730 cgd1_2730 cgd1_3080 cgd1_3080 cgd1_3160 cgd1_3160 cgd5_110 cgd5_110 cgd5_510 cgd5_510 cgd5_920 cgd5_920 cgd5_1030 cgd5_1030 cgd5_1690 cgd5_1690 cgd5_1740 cgd5_1740 cgd5_1790 cgd5_1790 cgd5_1890 cgd5_1890 cgd5_2350 cgd5_2350 cgd5_2460 cgd5_2460 cgd6_1700 cgd6_1700 cgd6_1680 cgd6_1680 cgd6_1560 cgd6_1560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cgd6_3490RNA-binding protein, putative. (153 aa)
cgd7_5490PRP18 (SFM+PRP18 domains). (337 aa)
cgd7_5380CtIP type zinc knuckle (C2H2). (266 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa)
cgd7_5320Cwf5-like with 2 ZnR domains (CCCH and RRM domains missing). (186 aa)
cgd6_3430RRM (2xRRMs) domaincontaining protein. (293 aa)
cgd6_3300CCCH+ringfinger domains protein. (311 aa)
cgd6_2830Splicing factor 3a 66kD N-terminus C2H2 domain. (216 aa)
cgd6_2560Uncharacterized protein. (1134 aa)
cgd6_2550Uncharacterized protein. (380 aa)
cgd6_1770Protein with C2H2 Zn finger, ASR2B-like N-and C-terminus. (668 aa)
cgd5_2880C1p1p GTpase. Pre-mRNA cleavaage complex protein. (601 aa)
cgd5_2960U5snrp Brr2 SFII RNA helicase (sec63 and the second part of the RNA). (1204 aa)
cgd5_3280Uncharacterized protein. (136 aa)
cgd4_1570Uncharacterized protein. (407 aa)
cgd4_3140WD repeat protein. (343 aa)
cgd4_150Pre-mRNA splicing protein Prp31p--like. (463 aa)
cgd4_27030 kDa splicing factor, SPF 30, tudor domain containing protein. (285 aa)
cgd4_460Nup54 domain-containing protein. (435 aa)
cgd4_820WD repeat protein. (737 aa)
Pap1pPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (699 aa)
cgd4_1090Uncharacterized protein. (177 aa)
Ms15pMs15p KH + 2 Znknuckle (C2HC). (471 aa)
cgd5_4060Matrin-type domain-containing protein. (198 aa)
cgd8_460Cleavage and polyadenylation specifity factor protein, CPSF metallobeta-lactamase. (780 aa)
cgd4_4230ATP-dependent helicase, putative. (800 aa)
cgd5_3800Uncharacterized protein. (367 aa)
cgd4_890Uncharacterized protein. (85 aa)
cgd4_3260Putative DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide. (72 aa)
cgd4_3190Small nuclear ribonucleoprotein Sm D2. (106 aa)
cgd4_1660Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
cgd5_2980SEC63 domain-containing protein. (367 aa)
cgd5_2970Uncharacterized protein. (622 aa)
cgd5_1130WD-40 repeat protein family / small nuclear ribonucleoprotein Prp4p-related. (439 aa)
cgd1_3470Fork head domain protein, putative. (195 aa)
cgd1_2950Uncharacterized protein. (216 aa)
cgd1_2910Sm domain-containing protein. (139 aa)
cgd1_2690Sm domain-containing protein. (67 aa)
cgd1_2650Uncharacterized protein. (867 aa)
cgd7_5160U1 small nuclear ribonucleoprotein A, rrm domain. (122 aa)
cgd7_4770DNA-directed RNA polymerase subunit. (129 aa)
cgd7_4600Abstrakt protein SF II helicase + Znknuckle C2HC (PA). (570 aa)
cgd7_3720DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1177 aa)
cgd7_3690Crooked neck protein HAT repeats. (736 aa)
cgd7_3230SLBP family of RNA binding proteins. (237 aa)
cgd7_2890SLBP family of RNA binding proteins. (353 aa)
cgd7_2740WD40 protein. (311 aa)
cgd7_2530Large membrane protein with signal peptide and transmembrane domain near carboxy terminus. (2387 aa)
cgd7_2160Pre-mRNA splicing factor SF3a. 2xSWAP domain protein. (462 aa)
cgd7_1180Cir_N domain-containing protein. (227 aa)
cgd7_1110Shares a domain with the CWFL/SRm300 family RNA binding proteins. (409 aa)
cgd7_1020G10 protein. (144 aa)
cgd7_970Syf1p. protein with 8 HAT domains. (1020 aa)
cgd7_640Prp16p pre-mRNA splicing factor. HrpA family SFII helicase. (1042 aa)
cgd7_520Cyclin'cyclophilin like peptidyl-prolyl cis-trans isomerase fused to WD40 repeats at the N-terminus. (778 aa)
cgd7_310Uncharacterized protein. (458 aa)
cgd6_990RRM domain containing protein. (281 aa)
cgd6_1540Putative histone mRNA hairpin-binding protein. (372 aa)
cgd6_580Cleavage and polyadenylation specificity factor subunit 2. (1196 aa)
cgd6_410Sgn1p-like RRM domain containing protein. (262 aa)
cgd6_400Pre-mRNA polyadenylation factor. (327 aa)
cgd1_1800Transducin / WD-40 repeat protein family. (493 aa)
cgd1_860Ubiquitin-like protein, putative. (73 aa)
cgd2_2970DNA-directed RNA polymerase II, putative. (178 aa)
cgd2_1660Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (169 aa)
cgd3_3690U5 snRNP 100 kD protein, putative; Belongs to the DEAD box helicase family. (529 aa)
cgd3_2310RRM domain-containing protein. (86 aa)
cgd8_5180Protein kinase domain-containing protein. (454 aa)
cgd8_2350Cyclophilin-RNA interacting protein, putative. (302 aa)
cgd6_4610mRNA export protein, putative. (333 aa)
cgd6_2400Uncharacterized protein. (100 aa)
cgd6_2150U1 snrnp, putative. (267 aa)
cgd7_4370RNA polymerase II, putative. (115 aa)
cgd7_3970Small nuclear ribonucleoprotein, putative. (62 aa)
cgd7_3960Pleiotropic regulator 1. (427 aa)
cgd7_3240Transcription activator, putative. (49 aa)
cgd7_1750Step II splicing factor SLU7, putative. (405 aa)
cgd6_3810Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (277 aa)
cgd6_4370RRM domain protein. (556 aa)
cgd6_4490RRM domain containing protein. (216 aa)
cgd6_4670Prp9p-like splicing factor 3a subunit 3 snRNP. (493 aa)
cgd6_4750Splicing factor 3B subunit1-like HEAT repeat containing protein. (1031 aa)
cgd6_4850PRP19 non-snRNP sliceosome component required for DNA repair. (576 aa)
cgd8_800Prp5p C terminal KH. eIF4A-1-family RNA SFII helicase. (934 aa)
cgd8_1480RPR domain containing protein, present in proteins involved in mRNA splicing. (324 aa)
cgd8_1560Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (189 aa)
cgd8_1950Protein CWC15. (214 aa)
cgd8_2340Cold shock RNA binding domain of the OB fold. (135 aa)
cgd8_2520Mtr4p like SKI family SFII helicase. (1280 aa)
cgd8_2650Uncharacterized protein. (3488 aa)
cgd8_2960NIC+MI domains containing protein. nucampholin/yeast Cwc22p like protein involved in mRNA splicing. (619 aa)
cgd8_3340PWI domain containing protein that is typically seen in spliceosomal proteins. (316 aa)
cgd8_3370Splicing factor SRP40 like 2x RRM domains. (416 aa)
cgd8_3690Mitosis protein DIM1. (142 aa)
cgd8_3900Sub2p like superfamily II helicase involved in snRNP biogenesis. (430 aa)
cgd8_4080WD-repeat protein. (575 aa)
cgd8_4100PRP43 involved in spliceosome disassembly mRNA splicing. (714 aa)
cgd8_4240Possible spliceosome factor. (1317 aa)
cgd8_4380SNW family nuclear protein. (431 aa)
cgd8_4520Large protein with possible domain of nucleoporin, Non-repetitive/WGA-negative nucleoporin. (2222 aa)
cgd8_4770CPSF_A domain-containing protein. (1965 aa)
cgd8_5130RRM domain-containing protein. (274 aa)
cgd8_5240U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit CCCh+RRM+CCCh-like. (256 aa)
cgd3_1060U1 like C2H2 zinc finger. (198 aa)
cgd3_1440U1 small nuclear ribonucleoprotein c like finger. (225 aa)
cgd3_1870DNA-directed RNA polymerase 2 subunit. (167 aa)
cgd3_1880Protein with 2x rrm domains. (1142 aa)
cgd3_1920Possible PRP38 pre-mRNA splicing factor family member. (261 aa)
cgd3_2230Nkap_C domain-containing protein. (212 aa)
cgd3_2360Putative nucleoporin, FG-rich motifs within N-terminal region. (1805 aa)
cgd3_2620DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1902 aa)
cgd3_2880U2 small nuclear ribonucleoprotein A' like LRR repeats. (257 aa)
cgd3_2890Prp8. JAB/PAD domain. (2379 aa)
cgd3_3070WD-40 repeat protein, SMART LisH domain. (595 aa)
cgd3_3880Snu114p GTpase, U5 snRNP-specific protein, 116 kDa. (1035 aa)
cgd3_4320RPOL4c domain-containing protein. (124 aa)
cgd2_980Putative DNA-directed RNA polymerase 2. (214 aa)
cgd2_1410Possible domain KOG3410, conserved alpha-helical protein. (142 aa)
cgd2_1480Splicing factor U2AF U2 SnRNP auxiliary factor large subunit, RRM domain. (438 aa)
cgd2_2810Uncharacterized protein. (230 aa)
cgd2_3510Cus1p U2 snRNP protein. (602 aa)
cgd2_4250SPAC1486.03c-like tuftelin-interacting protein, G-patch domain. (753 aa)
cgd1_1310Cleavage stimulation factor subunit 2 that has a CSF1 like RRM domain. (304 aa)
cgd1_2250Small nuclear ribonucleoprotein Sm D3. (143 aa)
cgd1_2260DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
cgd1_2710RNA polymerase II B3 subunit. (355 aa)
cgd1_2730Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x RRM domains. (693 aa)
cgd1_3080Splicing factor U2AF like SnRNP auxilary factor large subunit, RRM domain. (330 aa)
cgd1_3160mRNA 3' end processing protein RNA14, HAT repeats. (1452 aa)
cgd5_110CDC5 cell division cycle 5-like. (800 aa)
cgd5_510Symplekin_C domain-containing protein. (1720 aa)
cgd5_920Pre-mRNA splicing factor Pro1/Prp6. HAT repeat protein. (923 aa)
cgd5_1030Apicomplexan conserved protein. (400 aa)
cgd5_1690Cactin-like protein. (548 aa)
cgd5_1740Conserved protein, possible U4/U6 associated RNA splicing factor. (452 aa)
cgd5_1790Conserved eukaryotic protein. (175 aa)
cgd5_1890Uncharacterized protein. (321 aa)
cgd5_2350SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with a UBP finger at the N-terminus. (498 aa)
cgd5_2460RNA binding RGG repeats plus RRM domain containing protein. (857 aa)
cgd6_1700Nuclear cap-binding protein subunit 2. (213 aa)
cgd6_1680Splicing factor U2AF U2 snRNP auxiliary factor large subunit 3 RRM domains. (492 aa)
cgd6_1560Yju2p / cwf16-like Zn finger. (270 aa)
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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