Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Abd1p | cgd1_2260 | Q5CYC2 | Q5CSK9 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.736 |
| Abd1p | cgd1_2710 | Q5CYC2 | Q5CSH3 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | RNA polymerase II B3 subunit. | 0.781 |
| Abd1p | cgd1_3310 | Q5CYC2 | Q5CSC2 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | Cyclin domain protein, possible cyclin H; Belongs to the cyclin family. | 0.706 |
| Abd1p | cgd2_2060 | Q5CYC2 | Q5CTQ6 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.693 |
| Abd1p | cgd2_2970 | Q5CYC2 | A3FQ92 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | DNA-directed RNA polymerase II, putative. | 0.742 |
| Abd1p | cgd2_980 | Q5CYC2 | Q5CTZ0 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | Putative DNA-directed RNA polymerase 2. | 0.707 |
| Abd1p | cgd3_1870 | Q5CYC2 | Q5CUQ6 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | DNA-directed RNA polymerase 2 subunit. | 0.705 |
| Abd1p | cgd3_2620 | Q5CYC2 | Q5CUJ2 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.565 |
| Abd1p | cgd5_1030 | Q5CYC2 | Q5CRY2 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | Apicomplexan conserved protein. | 0.693 |
| Abd1p | cgd6_1700 | Q5CYC2 | Q5CXB8 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | Nuclear cap-binding protein subunit 2. | 0.764 |
| Abd1p | cgd6_2380 | Q5CYC2 | Q5CX59 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | mRNA capping enzyme RNA guanylyltransferase Ceg1p. | 0.996 |
| Abd1p | cgd6_4650 | Q5CYC2 | Q5CWL0 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | 5kows transcription initiation protein SPT5. | 0.992 |
| Abd1p | cgd6_5040 | Q5CYC2 | A3FPX7 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | Transcription factor, putative. | 0.829 |
| Abd1p | cgd7_3720 | Q5CYC2 | Q5CY45 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.789 |
| Abd1p | cgd8_4400 | Q5CYC2 | Q5CVE1 | Abd1p RNA (Guanine-7-methyltransferase (Cap methyltransferase)). | Transcription elongation factor TFIIS. | 0.526 |
| MED6 | cgd1_2260 | Q5CRJ7 | Q5CSK9 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.984 |
| MED6 | cgd1_2600 | Q5CRJ7 | Q5CSI1 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Transcription factor TAF5p, TBP associated protein involved in transcription. | 0.451 |
| MED6 | cgd1_2710 | Q5CRJ7 | Q5CSH3 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RNA polymerase II B3 subunit. | 0.991 |
| MED6 | cgd1_2800 | Q5CRJ7 | Q5CSG5 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.999 |
| MED6 | cgd1_3300 | Q5CRJ7 | Q5CSC3 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Ring domain protein. | 0.940 |
page 1 of 217