(12 nodes) poly(A)+ mRNA export from nucleus network (Trypanosoma cruzi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4DH59_TRYCC	TFIIS N-terminal domain-containing protein. (512 aa)
	Q4DGE4_TRYCC	Uncharacterized protein. (534 aa)
	Q4DFC6_TRYCC	Nuclear pore protein. (701 aa)
	Q4DDI8_TRYCC	Nuclear pore protein. (861 aa)
	Q4D9J7_TRYCC	TFIIS N-terminal domain-containing protein. (508 aa)
	Q4D4D4_TRYCC	Nucleoporin interacting component (NUP93), putative. (128 aa)
	Q4E2S7_TRYCC	Uncharacterized protein. (308 aa)
	Q4CXE4_TRYCC	C3H1-type domain-containing protein. (251 aa)
	Q4CXE1_TRYCC	Uncharacterized protein. (525 aa)
	Q4DV48_TRYCC	Uncharacterized protein. (769 aa)
	Q4DP97_TRYCC	C3H1-type domain-containing protein. (578 aa)
	Q4DP94_TRYCC	Uncharacterized protein. (530 aa)

Your Current Organism:

Trypanosoma cruzi

NCBI taxonomy Id: 353153
Other names: T. cruzi strain CL Brener, Trypanosoma cruzi strain CL Brener

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q4CXE1_TRYCC	Q4D4D4_TRYCC	Q4CXE1	Q4D4D4	Uncharacterized protein.	Nucleoporin interacting component (NUP93), putative.	0.643
Q4CXE1_TRYCC	Q4DDI8_TRYCC	Q4CXE1	Q4DDI8	Uncharacterized protein.	Nuclear pore protein.	0.643
Q4CXE1_TRYCC	Q4DFC6_TRYCC	Q4CXE1	Q4DFC6	Uncharacterized protein.	Nuclear pore protein.	0.643
Q4CXE4_TRYCC	Q4D4D4_TRYCC	Q4CXE4	Q4D4D4	C3H1-type domain-containing protein.	Nucleoporin interacting component (NUP93), putative.	0.643
Q4CXE4_TRYCC	Q4DDI8_TRYCC	Q4CXE4	Q4DDI8	C3H1-type domain-containing protein.	Nuclear pore protein.	0.643
Q4CXE4_TRYCC	Q4DFC6_TRYCC	Q4CXE4	Q4DFC6	C3H1-type domain-containing protein.	Nuclear pore protein.	0.643
Q4D4D4_TRYCC	Q4CXE1_TRYCC	Q4D4D4	Q4CXE1	Nucleoporin interacting component (NUP93), putative.	Uncharacterized protein.	0.643
Q4D4D4_TRYCC	Q4CXE4_TRYCC	Q4D4D4	Q4CXE4	Nucleoporin interacting component (NUP93), putative.	C3H1-type domain-containing protein.	0.643
Q4D4D4_TRYCC	Q4DP94_TRYCC	Q4D4D4	Q4DP94	Nucleoporin interacting component (NUP93), putative.	Uncharacterized protein.	0.643
Q4D4D4_TRYCC	Q4DP97_TRYCC	Q4D4D4	Q4DP97	Nucleoporin interacting component (NUP93), putative.	C3H1-type domain-containing protein.	0.643
Q4D4D4_TRYCC	Q4E2S7_TRYCC	Q4D4D4	Q4E2S7	Nucleoporin interacting component (NUP93), putative.	Uncharacterized protein.	0.643
Q4DDI8_TRYCC	Q4CXE1_TRYCC	Q4DDI8	Q4CXE1	Nuclear pore protein.	Uncharacterized protein.	0.643
Q4DDI8_TRYCC	Q4CXE4_TRYCC	Q4DDI8	Q4CXE4	Nuclear pore protein.	C3H1-type domain-containing protein.	0.643
Q4DDI8_TRYCC	Q4DP94_TRYCC	Q4DDI8	Q4DP94	Nuclear pore protein.	Uncharacterized protein.	0.643
Q4DDI8_TRYCC	Q4DP97_TRYCC	Q4DDI8	Q4DP97	Nuclear pore protein.	C3H1-type domain-containing protein.	0.643
Q4DDI8_TRYCC	Q4E2S7_TRYCC	Q4DDI8	Q4E2S7	Nuclear pore protein.	Uncharacterized protein.	0.643
Q4DFC6_TRYCC	Q4CXE1_TRYCC	Q4DFC6	Q4CXE1	Nuclear pore protein.	Uncharacterized protein.	0.643
Q4DFC6_TRYCC	Q4CXE4_TRYCC	Q4DFC6	Q4CXE4	Nuclear pore protein.	C3H1-type domain-containing protein.	0.643
Q4DFC6_TRYCC	Q4DP94_TRYCC	Q4DFC6	Q4DP94	Nuclear pore protein.	Uncharacterized protein.	0.643
Q4DFC6_TRYCC	Q4DP97_TRYCC	Q4DFC6	Q4DP97	Nuclear pore protein.	C3H1-type domain-containing protein.	0.643