(11 nodes) Proteasome binding network (Trypanosoma cruzi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4CYX4_TRYCC	UV excision repair RAD23-like protein, putative. (361 aa)
	Q4DPH9_TRYCC	Uncharacterized protein. (1848 aa)
	Q4DP13_TRYCC	UBA domain-containing protein. (335 aa)
	Q4DJY4_TRYCC	Uncharacterized protein. (247 aa)
	Q4DHW4_TRYCC	DUF3437 domain-containing protein. (2208 aa)
	Q4DET5_TRYCC	UBA domain-containing protein. (335 aa)
	Q4D7Y6_TRYCC	Uncharacterized protein. (265 aa)
	Q4D7G6_TRYCC	UV excision repair RAD23-like protein, putative. (361 aa)
	Q4D240_TRYCC	DUF3437 domain-containing protein. (277 aa)
	Q4D1N3_TRYCC	Uncharacterized protein. (247 aa)
	Q4CQM7_TRYCC	Uncharacterized protein. (265 aa)

Your Current Organism:

Trypanosoma cruzi

NCBI taxonomy Id: 353153
Other names: T. cruzi strain CL Brener, Trypanosoma cruzi strain CL Brener

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q4CQM7_TRYCC	Q4CYX4_TRYCC	Q4CQM7	Q4CYX4	Uncharacterized protein.	UV excision repair RAD23-like protein, putative.	0.521
Q4CQM7_TRYCC	Q4D240_TRYCC	Q4CQM7	Q4D240	Uncharacterized protein.	DUF3437 domain-containing protein.	0.667
Q4CQM7_TRYCC	Q4D7G6_TRYCC	Q4CQM7	Q4D7G6	Uncharacterized protein.	UV excision repair RAD23-like protein, putative.	0.521
Q4CQM7_TRYCC	Q4DET5_TRYCC	Q4CQM7	Q4DET5	Uncharacterized protein.	UBA domain-containing protein.	0.521
Q4CQM7_TRYCC	Q4DHW4_TRYCC	Q4CQM7	Q4DHW4	Uncharacterized protein.	DUF3437 domain-containing protein.	0.667
Q4CQM7_TRYCC	Q4DP13_TRYCC	Q4CQM7	Q4DP13	Uncharacterized protein.	UBA domain-containing protein.	0.521
Q4CQM7_TRYCC	Q4DPH9_TRYCC	Q4CQM7	Q4DPH9	Uncharacterized protein.	Uncharacterized protein.	0.667
Q4CYX4_TRYCC	Q4CQM7_TRYCC	Q4CYX4	Q4CQM7	UV excision repair RAD23-like protein, putative.	Uncharacterized protein.	0.521
Q4CYX4_TRYCC	Q4D1N3_TRYCC	Q4CYX4	Q4D1N3	UV excision repair RAD23-like protein, putative.	Uncharacterized protein.	0.521
Q4CYX4_TRYCC	Q4D7G6_TRYCC	Q4CYX4	Q4D7G6	UV excision repair RAD23-like protein, putative.	UV excision repair RAD23-like protein, putative.	0.900
Q4CYX4_TRYCC	Q4D7Y6_TRYCC	Q4CYX4	Q4D7Y6	UV excision repair RAD23-like protein, putative.	Uncharacterized protein.	0.521
Q4CYX4_TRYCC	Q4DJY4_TRYCC	Q4CYX4	Q4DJY4	UV excision repair RAD23-like protein, putative.	Uncharacterized protein.	0.521
Q4D1N3_TRYCC	Q4CYX4_TRYCC	Q4D1N3	Q4CYX4	Uncharacterized protein.	UV excision repair RAD23-like protein, putative.	0.521
Q4D1N3_TRYCC	Q4D240_TRYCC	Q4D1N3	Q4D240	Uncharacterized protein.	DUF3437 domain-containing protein.	0.667
Q4D1N3_TRYCC	Q4D7G6_TRYCC	Q4D1N3	Q4D7G6	Uncharacterized protein.	UV excision repair RAD23-like protein, putative.	0.521
Q4D1N3_TRYCC	Q4DET5_TRYCC	Q4D1N3	Q4DET5	Uncharacterized protein.	UBA domain-containing protein.	0.521
Q4D1N3_TRYCC	Q4DHW4_TRYCC	Q4D1N3	Q4DHW4	Uncharacterized protein.	DUF3437 domain-containing protein.	0.667
Q4D1N3_TRYCC	Q4DP13_TRYCC	Q4D1N3	Q4DP13	Uncharacterized protein.	UBA domain-containing protein.	0.521
Q4D1N3_TRYCC	Q4DPH9_TRYCC	Q4D1N3	Q4DPH9	Uncharacterized protein.	Uncharacterized protein.	0.667
Q4D240_TRYCC	Q4CQM7_TRYCC	Q4D240	Q4CQM7	DUF3437 domain-containing protein.	Uncharacterized protein.	0.667