9 items (Trypanosoma cruzi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4D0L7_TRYCC	Heat shock protein, putative. (349 aa)
	Q4CQS6_TRYCC	Heat shock protein 85, putative. (704 aa)
	Q4DKH8_TRYCC	Heat shock protein 85, putative. (550 aa)
	Q4DW89_TRYCC	Lipophosphoglycan biosynthetic protein, putative. (762 aa)
	Q4E2Q2_TRYCC	Heat shock protein, putative. (750 aa)
	Q4CQS5_TRYCC	Heat shock protein 85, putative. (54 aa)
	Q4DBM6_TRYCC	Heat shock protein 83, putative. (300 aa)
	Q4DBM7_TRYCC	Heat shock protein 85, putative. (704 aa)
	Q4D7V0_TRYCC	Lipophosphoglycan biosynthetic protein, putative. (235 aa)

Your Current Organism:

Trypanosoma cruzi

NCBI taxonomy Id: 353153
Other names: T. cruzi strain CL Brener, Trypanosoma cruzi strain CL Brener

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q4CQS5_TRYCC	Q4DKH8_TRYCC	Q4CQS5	Q4DKH8	Heat shock protein 85, putative.	Heat shock protein 85, putative.	0.504
Q4CQS5_TRYCC	Q4E2Q2_TRYCC	Q4CQS5	Q4E2Q2	Heat shock protein 85, putative.	Heat shock protein, putative.	0.414
Q4CQS6_TRYCC	Q4DBM7_TRYCC	Q4CQS6	Q4DBM7	Heat shock protein 85, putative.	Heat shock protein 85, putative.	0.900
Q4D0L7_TRYCC	Q4DKH8_TRYCC	Q4D0L7	Q4DKH8	Heat shock protein, putative.	Heat shock protein 85, putative.	0.509
Q4D7V0_TRYCC	Q4DKH8_TRYCC	Q4D7V0	Q4DKH8	Lipophosphoglycan biosynthetic protein, putative.	Heat shock protein 85, putative.	0.672
Q4DBM7_TRYCC	Q4CQS6_TRYCC	Q4DBM7	Q4CQS6	Heat shock protein 85, putative.	Heat shock protein 85, putative.	0.900
Q4DKH8_TRYCC	Q4CQS5_TRYCC	Q4DKH8	Q4CQS5	Heat shock protein 85, putative.	Heat shock protein 85, putative.	0.504
Q4DKH8_TRYCC	Q4D0L7_TRYCC	Q4DKH8	Q4D0L7	Heat shock protein 85, putative.	Heat shock protein, putative.	0.509
Q4DKH8_TRYCC	Q4D7V0_TRYCC	Q4DKH8	Q4D7V0	Heat shock protein 85, putative.	Lipophosphoglycan biosynthetic protein, putative.	0.672
Q4E2Q2_TRYCC	Q4CQS5_TRYCC	Q4E2Q2	Q4CQS5	Heat shock protein, putative.	Heat shock protein 85, putative.	0.414