(11 nodes) K Homology domain, type 1 superfamily network (Trypanosoma cruzi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4D2P8_TRYCC	Uncharacterized protein. (211 aa)
	Q4DUX1_TRYCC	Uncharacterized protein. (869 aa)
	Q4DJP9_TRYCC	Smr domain-containing protein. (284 aa)
	Q4CNK3_TRYCC	Branch point binding protein, putative. (267 aa)
	Q4DUC2_TRYCC	Ribosomal RNA processing protein 40, putative. (300 aa)
	Q4CUM5_TRYCC	Exosome complex exonuclease, putative. (302 aa)
	Q4CUW3_TRYCC	Smr domain-containing protein. (284 aa)
	Q4DJ36_TRYCC	Uncharacterized protein. (869 aa)
	Q4DHE3_TRYCC	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (292 aa)
	Q4DCN2_TRYCC	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (292 aa)
	Q4DCG9_TRYCC	Exosome complex exonuclease, putative. (329 aa)

Your Current Organism:

Trypanosoma cruzi

NCBI taxonomy Id: 353153
Other names: T. cruzi strain CL Brener, Trypanosoma cruzi strain CL Brener

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q4CUM5_TRYCC	Q4D2P8_TRYCC	Q4CUM5	Q4D2P8	Exosome complex exonuclease, putative.	Uncharacterized protein.	0.674
Q4CUM5_TRYCC	Q4DCG9_TRYCC	Q4CUM5	Q4DCG9	Exosome complex exonuclease, putative.	Exosome complex exonuclease, putative.	0.900
Q4CUM5_TRYCC	Q4DCN2_TRYCC	Q4CUM5	Q4DCN2	Exosome complex exonuclease, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.858
Q4CUM5_TRYCC	Q4DHE3_TRYCC	Q4CUM5	Q4DHE3	Exosome complex exonuclease, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.858
Q4CUM5_TRYCC	Q4DUC2_TRYCC	Q4CUM5	Q4DUC2	Exosome complex exonuclease, putative.	Ribosomal RNA processing protein 40, putative.	0.999
Q4D2P8_TRYCC	Q4CUM5_TRYCC	Q4D2P8	Q4CUM5	Uncharacterized protein.	Exosome complex exonuclease, putative.	0.674
Q4D2P8_TRYCC	Q4DCG9_TRYCC	Q4D2P8	Q4DCG9	Uncharacterized protein.	Exosome complex exonuclease, putative.	0.674
Q4D2P8_TRYCC	Q4DCN2_TRYCC	Q4D2P8	Q4DCN2	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.996
Q4D2P8_TRYCC	Q4DHE3_TRYCC	Q4D2P8	Q4DHE3	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.996
Q4D2P8_TRYCC	Q4DUC2_TRYCC	Q4D2P8	Q4DUC2	Uncharacterized protein.	Ribosomal RNA processing protein 40, putative.	0.831
Q4DCG9_TRYCC	Q4CUM5_TRYCC	Q4DCG9	Q4CUM5	Exosome complex exonuclease, putative.	Exosome complex exonuclease, putative.	0.900
Q4DCG9_TRYCC	Q4D2P8_TRYCC	Q4DCG9	Q4D2P8	Exosome complex exonuclease, putative.	Uncharacterized protein.	0.674
Q4DCG9_TRYCC	Q4DCN2_TRYCC	Q4DCG9	Q4DCN2	Exosome complex exonuclease, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.858
Q4DCG9_TRYCC	Q4DHE3_TRYCC	Q4DCG9	Q4DHE3	Exosome complex exonuclease, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.858
Q4DCG9_TRYCC	Q4DUC2_TRYCC	Q4DCG9	Q4DUC2	Exosome complex exonuclease, putative.	Ribosomal RNA processing protein 40, putative.	0.999
Q4DCN2_TRYCC	Q4CUM5_TRYCC	Q4DCN2	Q4CUM5	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Exosome complex exonuclease, putative.	0.858
Q4DCN2_TRYCC	Q4D2P8_TRYCC	Q4DCN2	Q4D2P8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.996
Q4DCN2_TRYCC	Q4DCG9_TRYCC	Q4DCN2	Q4DCG9	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Exosome complex exonuclease, putative.	0.858
Q4DCN2_TRYCC	Q4DUC2_TRYCC	Q4DCN2	Q4DUC2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosomal RNA processing protein 40, putative.	0.941
Q4DHE3_TRYCC	Q4CUM5_TRYCC	Q4DHE3	Q4CUM5	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Exosome complex exonuclease, putative.	0.858