(6 nodes) Mixed, incl. GMP synthase, C-terminal, and GMP synthase C terminal domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_007393	Putative GMP synthase. (63 aa)
	APZ42_015632	Putative GMP synthase. (91 aa)
	APZ42_011310	Putative GMP synthase. (112 aa)
	APZ42_008200	GMP synthase. (68 aa)
	APZ42_023401	Putative GMP synthase. (230 aa)
	APZ42_018679	GMP synthase. (337 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_007393	APZ42_011310	A0A162D219	A0A162SJW3	Putative GMP synthase.	Putative GMP synthase.	0.523
APZ42_007393	APZ42_015632	A0A162D219	A0A162NRN6	Putative GMP synthase.	Putative GMP synthase.	0.520
APZ42_008200	APZ42_015632	A0A164ET56	A0A162NRN6	GMP synthase.	Putative GMP synthase.	0.460
APZ42_008200	APZ42_018679	A0A164ET56	A0A164YR76	GMP synthase.	GMP synthase.	0.471
APZ42_011310	APZ42_007393	A0A162SJW3	A0A162D219	Putative GMP synthase.	Putative GMP synthase.	0.523
APZ42_015632	APZ42_007393	A0A162NRN6	A0A162D219	Putative GMP synthase.	Putative GMP synthase.	0.520
APZ42_015632	APZ42_008200	A0A162NRN6	A0A164ET56	Putative GMP synthase.	GMP synthase.	0.460
APZ42_015632	APZ42_018679	A0A162NRN6	A0A164YR76	Putative GMP synthase.	GMP synthase.	0.413
APZ42_015632	APZ42_023401	A0A162NRN6	A0A164UZL3	Putative GMP synthase.	Putative GMP synthase.	0.462
APZ42_018679	APZ42_008200	A0A164YR76	A0A164ET56	GMP synthase.	GMP synthase.	0.471
APZ42_018679	APZ42_015632	A0A164YR76	A0A162NRN6	GMP synthase.	Putative GMP synthase.	0.413
APZ42_023401	APZ42_015632	A0A164UZL3	A0A162NRN6	Putative GMP synthase.	Putative GMP synthase.	0.462