(5 nodes) Mixed, incl. Mitochondrial outer membrane permeabilization, and Small G protein signalling modulator 1/2, Rab-binding domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_017319	TBC1 domain family member 13. (671 aa)
	APZ42_030931	Microtubule-associated proteins 1A/1B light chain 3A. (123 aa)
	APZ42_019518	BCL2/adenovirus E1B 19 kDa protein-interacting protein. (203 aa)
	APZ42_021580	Putative FUN14 domain-containing protein 1. (120 aa)
	APZ42_020223	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (149 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_017319	APZ42_020223	A0A0P4ZEF6	A0A164Y401	TBC1 domain family member 13.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.944
APZ42_017319	APZ42_021580	A0A0P4ZEF6	A0A164WJP9	TBC1 domain family member 13.	Putative FUN14 domain-containing protein 1.	0.512
APZ42_017319	APZ42_030931	A0A0P4ZEF6	A0A0P5R640	TBC1 domain family member 13.	Microtubule-associated proteins 1A/1B light chain 3A.	0.734
APZ42_019518	APZ42_020223	A0A162CNJ4	A0A164Y401	BCL2/adenovirus E1B 19 kDa protein-interacting protein.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.503
APZ42_019518	APZ42_021580	A0A162CNJ4	A0A164WJP9	BCL2/adenovirus E1B 19 kDa protein-interacting protein.	Putative FUN14 domain-containing protein 1.	0.573
APZ42_019518	APZ42_030931	A0A162CNJ4	A0A0P5R640	BCL2/adenovirus E1B 19 kDa protein-interacting protein.	Microtubule-associated proteins 1A/1B light chain 3A.	0.825
APZ42_020223	APZ42_017319	A0A164Y401	A0A0P4ZEF6	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	TBC1 domain family member 13.	0.944
APZ42_020223	APZ42_019518	A0A164Y401	A0A162CNJ4	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	BCL2/adenovirus E1B 19 kDa protein-interacting protein.	0.503
APZ42_020223	APZ42_021580	A0A164Y401	A0A164WJP9	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	Putative FUN14 domain-containing protein 1.	0.540
APZ42_021580	APZ42_017319	A0A164WJP9	A0A0P4ZEF6	Putative FUN14 domain-containing protein 1.	TBC1 domain family member 13.	0.512
APZ42_021580	APZ42_019518	A0A164WJP9	A0A162CNJ4	Putative FUN14 domain-containing protein 1.	BCL2/adenovirus E1B 19 kDa protein-interacting protein.	0.573
APZ42_021580	APZ42_020223	A0A164WJP9	A0A164Y401	Putative FUN14 domain-containing protein 1.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.540
APZ42_021580	APZ42_030931	A0A164WJP9	A0A0P5R640	Putative FUN14 domain-containing protein 1.	Microtubule-associated proteins 1A/1B light chain 3A.	0.994
APZ42_030931	APZ42_017319	A0A0P5R640	A0A0P4ZEF6	Microtubule-associated proteins 1A/1B light chain 3A.	TBC1 domain family member 13.	0.734
APZ42_030931	APZ42_019518	A0A0P5R640	A0A162CNJ4	Microtubule-associated proteins 1A/1B light chain 3A.	BCL2/adenovirus E1B 19 kDa protein-interacting protein.	0.825
APZ42_030931	APZ42_021580	A0A0P5R640	A0A164WJP9	Microtubule-associated proteins 1A/1B light chain 3A.	Putative FUN14 domain-containing protein 1.	0.994