(11 nodes) Mixed, incl. The retinoid cycle in cones (daylight vision), and Nuclear outer membrane network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_011800	Dehydrogenase/reductase SDR family member. (277 aa)
	APZ42_019175	Short-chain dehydrogenase/reductase family 16C member 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	APZ42_015954	Dehydrogenase/reductase sdr family member. (259 aa)
	APZ42_032143	Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (304 aa)
	APZ42_032135	Short-chain dehydrogenase/reductase family 16C; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
	APZ42_021633	All-trans-retinol 13,14-reductase. (632 aa)
	APZ42_001585	Retinol dehydrogenase 12. (199 aa)
	APZ42_030720	Retinal dehydrogenase 1. (108 aa)
	APZ42_027262	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)
	APZ42_018886	All-trans-retinol 13,14-reductase. (635 aa)
	APZ42_018888	Uncharacterized protein. (474 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001585	APZ42_011800	A0A164IVS5	A0A0N8DC99	Retinol dehydrogenase 12.	Dehydrogenase/reductase SDR family member.	0.622
APZ42_001585	APZ42_015954	A0A164IVS5	A0A0P5SIB3	Retinol dehydrogenase 12.	Dehydrogenase/reductase sdr family member.	0.506
APZ42_001585	APZ42_018886	A0A164IVS5	A0A164YWL2	Retinol dehydrogenase 12.	All-trans-retinol 13,14-reductase.	0.762
APZ42_001585	APZ42_018888	A0A164IVS5	A0A164YWN0	Retinol dehydrogenase 12.	Uncharacterized protein.	0.762
APZ42_001585	APZ42_019175	A0A164IVS5	A0A0P4XDL6	Retinol dehydrogenase 12.	Short-chain dehydrogenase/reductase family 16C member 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.529
APZ42_001585	APZ42_021633	A0A164IVS5	A0A162C9R8	Retinol dehydrogenase 12.	All-trans-retinol 13,14-reductase.	0.762
APZ42_001585	APZ42_030720	A0A164IVS5	A0A164NII2	Retinol dehydrogenase 12.	Retinal dehydrogenase 1.	0.580
APZ42_001585	APZ42_032135	A0A164IVS5	A0A0P6EA41	Retinol dehydrogenase 12.	Short-chain dehydrogenase/reductase family 16C; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.529
APZ42_001585	APZ42_032143	A0A164IVS5	A0A0P5Z9D8	Retinol dehydrogenase 12.	Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.529
APZ42_011800	APZ42_001585	A0A0N8DC99	A0A164IVS5	Dehydrogenase/reductase SDR family member.	Retinol dehydrogenase 12.	0.622
APZ42_011800	APZ42_015954	A0A0N8DC99	A0A0P5SIB3	Dehydrogenase/reductase SDR family member.	Dehydrogenase/reductase sdr family member.	0.632
APZ42_011800	APZ42_018886	A0A0N8DC99	A0A164YWL2	Dehydrogenase/reductase SDR family member.	All-trans-retinol 13,14-reductase.	0.839
APZ42_011800	APZ42_018888	A0A0N8DC99	A0A164YWN0	Dehydrogenase/reductase SDR family member.	Uncharacterized protein.	0.839
APZ42_011800	APZ42_019175	A0A0N8DC99	A0A0P4XDL6	Dehydrogenase/reductase SDR family member.	Short-chain dehydrogenase/reductase family 16C member 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.644
APZ42_011800	APZ42_021633	A0A0N8DC99	A0A162C9R8	Dehydrogenase/reductase SDR family member.	All-trans-retinol 13,14-reductase.	0.839
APZ42_011800	APZ42_027262	A0A0N8DC99	A0A164REG3	Dehydrogenase/reductase SDR family member.	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.622
APZ42_011800	APZ42_030720	A0A0N8DC99	A0A164NII2	Dehydrogenase/reductase SDR family member.	Retinal dehydrogenase 1.	0.613
APZ42_011800	APZ42_032135	A0A0N8DC99	A0A0P6EA41	Dehydrogenase/reductase SDR family member.	Short-chain dehydrogenase/reductase family 16C; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.633
APZ42_011800	APZ42_032143	A0A0N8DC99	A0A0P5Z9D8	Dehydrogenase/reductase SDR family member.	Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.636
APZ42_015954	APZ42_001585	A0A0P5SIB3	A0A164IVS5	Dehydrogenase/reductase sdr family member.	Retinol dehydrogenase 12.	0.506