STRINGSTRING
APZ42_012657 APZ42_012657 APZ42_015941 APZ42_015941 APZ42_021632 APZ42_021632 APZ42_022415 APZ42_022415 APZ42_016152 APZ42_016152 APZ42_034049 APZ42_034049 APZ42_015944 APZ42_015944 APZ42_025758 APZ42_025758 APZ42_031667 APZ42_031667 APZ42_018950 APZ42_018950 APZ42_003302 APZ42_003302 APZ42_026850 APZ42_026850 APZ42_026624 APZ42_026624 APZ42_014949 APZ42_014949 APZ42_015014 APZ42_015014 APZ42_015303 APZ42_015303 APZ42_012371 APZ42_012371 APZ42_012178 APZ42_012178 APZ42_004492 APZ42_004492 APZ42_029431 APZ42_029431 APZ42_026286 APZ42_026286 APZ42_025821 APZ42_025821 APZ42_024378 APZ42_024378 APZ42_022006 APZ42_022006 APZ42_020706 APZ42_020706 APZ42_019060 APZ42_019060 APZ42_018881 APZ42_018881 APZ42_017968 APZ42_017968 APZ42_017326 APZ42_017326 APZ42_016673 APZ42_016673 APZ42_016753 APZ42_016753 APZ42_016298 APZ42_016298
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_012657Cleavage and polyadenylation specificity factor subunit 2. (734 aa)
APZ42_015941Cleavage stimulation factor subunit 1. (430 aa)
APZ42_021632Cleavage and polyadenylation specificity factor subunit 7. (588 aa)
APZ42_022415DNA cross-link repair 1A protein. (824 aa)
APZ42_016152Cleavage and polyadenylation specificity factor subunit 4. (277 aa)
APZ42_034049Putative ATP-dependent RNA helicase YTHDC2. (1413 aa)
APZ42_015944WD repeat-containing protein 82. (320 aa)
APZ42_025758Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (427 aa)
APZ42_031667Cleavage and polyadenylation specificity factor subunit 3. (689 aa)
APZ42_018950Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (635 aa)
APZ42_003302Putative Facilitated trehalose transporter Tret1. (71 aa)
APZ42_026850Cleavage stimulation factor 64 kDa subunit. (403 aa)
APZ42_026624Suppressor of forked protein. (672 aa)
APZ42_014949Fip1 domain-containing protein. (535 aa)
APZ42_015014Cleavage and polyadenylation specificity factor subunit 1. (1380 aa)
APZ42_015303Meckelin. (1091 aa)
APZ42_012371Uncharacterized protein. (946 aa)
APZ42_012178Cleavage stimulation factor 64 kDa subunit. (81 aa)
APZ42_004492DWNN domain-containing protein. (110 aa)
APZ42_029431Putative Suppressor of sable. (913 aa)
APZ42_026286Fizzy-related protein. (1396 aa)
APZ42_025821Bromo domain-containing protein. (683 aa)
APZ42_024378Uncharacterized protein. (333 aa)
APZ42_022006Wd repeat domain-containing-like protein. (1218 aa)
APZ42_020706Putative ATP-dependent RNA helicase YTHDC2. (1270 aa)
APZ42_019060Putative Pre-mRNA cleavage complex 2 protein Pcf11. (1496 aa)
APZ42_018881Symplekin. (1109 aa)
APZ42_017968DRMBL domain-containing protein. (493 aa)
APZ42_017326Uncharacterized protein. (1161 aa)
APZ42_016673RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (195 aa)
APZ42_016753Something that sticks-like glue. (1122 aa)
APZ42_016298YTH domain-containing 1-like protein. (570 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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