STRINGSTRING
APZ42_032305 APZ42_032305 APZ42_021841 APZ42_021841 APZ42_018623 APZ42_018623 APZ42_021219 APZ42_021219 APZ42_018802 APZ42_018802
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_032305Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (333 aa)
APZ42_021841Ras-related protein Rab-7a. (208 aa)
APZ42_018623Gtp-binding protein parf partner of arf. (563 aa)
APZ42_021219Rab proteins geranylgeranyltransferase component A. (494 aa)
APZ42_018802Geranylgeranyl transferase type-2 subunit alpha. (292 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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