(5 nodes) Mixed, incl. Regulation of GTP binding, and Folliculin/SMCR8, tripartite DENN domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_025679	Cyclin G-like protein. (389 aa)
	APZ42_020739	Leishmanolysin-like peptidase. (685 aa)
	APZ42_020662	Uncharacterized protein. (467 aa)
	APZ42_023138	Smith-Magenis syndrome chromosomal region candidate gene 8 protein. (246 aa)
	APZ42_015118	Ras-related protein Rab-39B. (205 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_015118	APZ42_020662	A0A162P7B8	A0A0P5DRC3	Ras-related protein Rab-39B.	Uncharacterized protein.	0.792
APZ42_015118	APZ42_020739	A0A162P7B8	A0A0N8CGJ4	Ras-related protein Rab-39B.	Leishmanolysin-like peptidase.	0.764
APZ42_015118	APZ42_023138	A0A162P7B8	A0A0P5FEY5	Ras-related protein Rab-39B.	Smith-Magenis syndrome chromosomal region candidate gene 8 protein.	0.804
APZ42_015118	APZ42_025679	A0A162P7B8	A0A0N8AMS4	Ras-related protein Rab-39B.	Cyclin G-like protein.	0.673
APZ42_020662	APZ42_015118	A0A0P5DRC3	A0A162P7B8	Uncharacterized protein.	Ras-related protein Rab-39B.	0.792
APZ42_020662	APZ42_020739	A0A0P5DRC3	A0A0N8CGJ4	Uncharacterized protein.	Leishmanolysin-like peptidase.	0.972
APZ42_020662	APZ42_023138	A0A0P5DRC3	A0A0P5FEY5	Uncharacterized protein.	Smith-Magenis syndrome chromosomal region candidate gene 8 protein.	0.994
APZ42_020662	APZ42_025679	A0A0P5DRC3	A0A0N8AMS4	Uncharacterized protein.	Cyclin G-like protein.	0.786
APZ42_020739	APZ42_015118	A0A0N8CGJ4	A0A162P7B8	Leishmanolysin-like peptidase.	Ras-related protein Rab-39B.	0.764
APZ42_020739	APZ42_020662	A0A0N8CGJ4	A0A0P5DRC3	Leishmanolysin-like peptidase.	Uncharacterized protein.	0.972
APZ42_020739	APZ42_025679	A0A0N8CGJ4	A0A0N8AMS4	Leishmanolysin-like peptidase.	Cyclin G-like protein.	0.664
APZ42_023138	APZ42_015118	A0A0P5FEY5	A0A162P7B8	Smith-Magenis syndrome chromosomal region candidate gene 8 protein.	Ras-related protein Rab-39B.	0.804
APZ42_023138	APZ42_020662	A0A0P5FEY5	A0A0P5DRC3	Smith-Magenis syndrome chromosomal region candidate gene 8 protein.	Uncharacterized protein.	0.994
APZ42_023138	APZ42_025679	A0A0P5FEY5	A0A0N8AMS4	Smith-Magenis syndrome chromosomal region candidate gene 8 protein.	Cyclin G-like protein.	0.664
APZ42_025679	APZ42_015118	A0A0N8AMS4	A0A162P7B8	Cyclin G-like protein.	Ras-related protein Rab-39B.	0.673
APZ42_025679	APZ42_020662	A0A0N8AMS4	A0A0P5DRC3	Cyclin G-like protein.	Uncharacterized protein.	0.786
APZ42_025679	APZ42_020739	A0A0N8AMS4	A0A0N8CGJ4	Cyclin G-like protein.	Leishmanolysin-like peptidase.	0.664
APZ42_025679	APZ42_023138	A0A0N8AMS4	A0A0P5FEY5	Cyclin G-like protein.	Smith-Magenis syndrome chromosomal region candidate gene 8 protein.	0.664