(6 nodes) Mixed, incl. Integral membrane protein DGCR2/IDD, and Reelin network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_017480	Chitin deacetylase 9-like protein. (402 aa)
	APZ42_016046	Low-density lipoprotein receptor ldl. (489 aa)
	APZ42_027343	Integral membrane protein DGCR2/IDD. (375 aa)
	APZ42_014538	CUB domain-containing protein. (1069 aa)
	APZ42_018812	Dickkopf_N domain-containing protein. (276 aa)
	APZ42_025310	Uncharacterized protein. (661 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_014538	APZ42_017480	A0A0P5YGC6	A0A0N8DBU8	CUB domain-containing protein.	Chitin deacetylase 9-like protein.	0.557
APZ42_014538	APZ42_018812	A0A0P5YGC6	A0A162CPY3	CUB domain-containing protein.	Dickkopf_N domain-containing protein.	0.557
APZ42_014538	APZ42_025310	A0A0P5YGC6	A0A164T8H6	CUB domain-containing protein.	Uncharacterized protein.	0.652
APZ42_016046	APZ42_017480	A0A0P5BBV3	A0A0N8DBU8	Low-density lipoprotein receptor ldl.	Chitin deacetylase 9-like protein.	0.557
APZ42_016046	APZ42_018812	A0A0P5BBV3	A0A162CPY3	Low-density lipoprotein receptor ldl.	Dickkopf_N domain-containing protein.	0.557
APZ42_016046	APZ42_025310	A0A0P5BBV3	A0A164T8H6	Low-density lipoprotein receptor ldl.	Uncharacterized protein.	0.652
APZ42_017480	APZ42_014538	A0A0N8DBU8	A0A0P5YGC6	Chitin deacetylase 9-like protein.	CUB domain-containing protein.	0.557
APZ42_017480	APZ42_016046	A0A0N8DBU8	A0A0P5BBV3	Chitin deacetylase 9-like protein.	Low-density lipoprotein receptor ldl.	0.557
APZ42_017480	APZ42_027343	A0A0N8DBU8	A0A0P5FMX0	Chitin deacetylase 9-like protein.	Integral membrane protein DGCR2/IDD.	0.557
APZ42_018812	APZ42_014538	A0A162CPY3	A0A0P5YGC6	Dickkopf_N domain-containing protein.	CUB domain-containing protein.	0.557
APZ42_018812	APZ42_016046	A0A162CPY3	A0A0P5BBV3	Dickkopf_N domain-containing protein.	Low-density lipoprotein receptor ldl.	0.557
APZ42_018812	APZ42_027343	A0A162CPY3	A0A0P5FMX0	Dickkopf_N domain-containing protein.	Integral membrane protein DGCR2/IDD.	0.557
APZ42_025310	APZ42_014538	A0A164T8H6	A0A0P5YGC6	Uncharacterized protein.	CUB domain-containing protein.	0.652
APZ42_025310	APZ42_016046	A0A164T8H6	A0A0P5BBV3	Uncharacterized protein.	Low-density lipoprotein receptor ldl.	0.652
APZ42_025310	APZ42_027343	A0A164T8H6	A0A0P5FMX0	Uncharacterized protein.	Integral membrane protein DGCR2/IDD.	0.652
APZ42_027343	APZ42_017480	A0A0P5FMX0	A0A0N8DBU8	Integral membrane protein DGCR2/IDD.	Chitin deacetylase 9-like protein.	0.557
APZ42_027343	APZ42_018812	A0A0P5FMX0	A0A162CPY3	Integral membrane protein DGCR2/IDD.	Dickkopf_N domain-containing protein.	0.557
APZ42_027343	APZ42_025310	A0A0P5FMX0	A0A164T8H6	Integral membrane protein DGCR2/IDD.	Uncharacterized protein.	0.652