(6 nodes) Mixed, incl. Collagen fibril organization, and Immunoglobulin I-set domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016100	Putative Leucine-rich repeat-containing protein 3. (352 aa)
	APZ42_030757	Peroxinectin. (279 aa)
	APZ42_030071	Uncharacterized protein. (594 aa)
	APZ42_026629	Cardinal. (692 aa)
	APZ42_024675	Uncharacterized protein. (552 aa)
	APZ42_024600	Peroxidasin. (1075 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_016100	APZ42_024600	A0A162NKV7	A0A164TWN8	Putative Leucine-rich repeat-containing protein 3.	Peroxidasin.	0.899
APZ42_016100	APZ42_024675	A0A162NKV7	A0A164TU29	Putative Leucine-rich repeat-containing protein 3.	Uncharacterized protein.	0.889
APZ42_016100	APZ42_026629	A0A162NKV7	A0A164S2K3	Putative Leucine-rich repeat-containing protein 3.	Cardinal.	0.896
APZ42_016100	APZ42_030071	A0A162NKV7	A0A164P328	Putative Leucine-rich repeat-containing protein 3.	Uncharacterized protein.	0.891
APZ42_016100	APZ42_030757	A0A162NKV7	A0A164NBH3	Putative Leucine-rich repeat-containing protein 3.	Peroxinectin.	0.899
APZ42_024600	APZ42_016100	A0A164TWN8	A0A162NKV7	Peroxidasin.	Putative Leucine-rich repeat-containing protein 3.	0.899
APZ42_024675	APZ42_016100	A0A164TU29	A0A162NKV7	Uncharacterized protein.	Putative Leucine-rich repeat-containing protein 3.	0.889
APZ42_024675	APZ42_030757	A0A164TU29	A0A164NBH3	Uncharacterized protein.	Peroxinectin.	0.536
APZ42_026629	APZ42_016100	A0A164S2K3	A0A162NKV7	Cardinal.	Putative Leucine-rich repeat-containing protein 3.	0.896
APZ42_030071	APZ42_016100	A0A164P328	A0A162NKV7	Uncharacterized protein.	Putative Leucine-rich repeat-containing protein 3.	0.891
APZ42_030757	APZ42_016100	A0A164NBH3	A0A162NKV7	Peroxinectin.	Putative Leucine-rich repeat-containing protein 3.	0.899
APZ42_030757	APZ42_024675	A0A164NBH3	A0A164TU29	Peroxinectin.	Uncharacterized protein.	0.536