(11 nodes) Mixed, incl. NGF-stimulated transcription, and DNA-binding protein inhibitor network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_027591	Extra macrochaetae-like protein. (113 aa)
	APZ42_015061	Helix-loop-helix delilah-like protein. (322 aa)
	APZ42_013368	Putative Achaete-scute. (169 aa)
	APZ42_012209	Putative Myogenic factor 6. (316 aa)
	APZ42_002871	Uncharacterized protein. (135 aa)
	APZ42_024081	Extra macrochaetae-like protein. (153 aa)
	APZ42_023386	Putative Daughterless protein. (68 aa)
	APZ42_023139	Putative Transcription factor 23. (130 aa)
	APZ42_018678	Putative Myocyte-specific enhancer factor 2A. (384 aa)
	APZ42_016999	Achaete-scute complex protein T3. (291 aa)
	APZ42_016998	BHLH domain-containing protein. (406 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002871	APZ42_012209	A0A164HZG8	A0A162S6M9	Uncharacterized protein.	Putative Myogenic factor 6.	0.925
APZ42_002871	APZ42_013368	A0A164HZG8	A0A162QXL0	Uncharacterized protein.	Putative Achaete-scute.	0.820
APZ42_002871	APZ42_015061	A0A164HZG8	A0A162P4U5	Uncharacterized protein.	Helix-loop-helix delilah-like protein.	0.650
APZ42_002871	APZ42_016998	A0A164HZG8	A0A165AA93	Uncharacterized protein.	BHLH domain-containing protein.	0.858
APZ42_002871	APZ42_016999	A0A164HZG8	A0A165AA79	Uncharacterized protein.	Achaete-scute complex protein T3.	0.858
APZ42_002871	APZ42_018678	A0A164HZG8	A0A164YRC6	Uncharacterized protein.	Putative Myocyte-specific enhancer factor 2A.	0.622
APZ42_002871	APZ42_023139	A0A164HZG8	A0A164V7E4	Uncharacterized protein.	Putative Transcription factor 23.	0.735
APZ42_002871	APZ42_024081	A0A164HZG8	A0A164UFV0	Uncharacterized protein.	Extra macrochaetae-like protein.	0.877
APZ42_002871	APZ42_027591	A0A164HZG8	A0A0P5ZT82	Uncharacterized protein.	Extra macrochaetae-like protein.	0.877
APZ42_012209	APZ42_002871	A0A162S6M9	A0A164HZG8	Putative Myogenic factor 6.	Uncharacterized protein.	0.925
APZ42_012209	APZ42_018678	A0A162S6M9	A0A164YRC6	Putative Myogenic factor 6.	Putative Myocyte-specific enhancer factor 2A.	0.813
APZ42_012209	APZ42_023386	A0A162S6M9	A0A164UZQ6	Putative Myogenic factor 6.	Putative Daughterless protein.	0.925
APZ42_012209	APZ42_024081	A0A162S6M9	A0A164UFV0	Putative Myogenic factor 6.	Extra macrochaetae-like protein.	0.481
APZ42_012209	APZ42_027591	A0A162S6M9	A0A0P5ZT82	Putative Myogenic factor 6.	Extra macrochaetae-like protein.	0.481
APZ42_013368	APZ42_002871	A0A162QXL0	A0A164HZG8	Putative Achaete-scute.	Uncharacterized protein.	0.820
APZ42_013368	APZ42_023386	A0A162QXL0	A0A164UZQ6	Putative Achaete-scute.	Putative Daughterless protein.	0.820
APZ42_013368	APZ42_024081	A0A162QXL0	A0A164UFV0	Putative Achaete-scute.	Extra macrochaetae-like protein.	0.423
APZ42_013368	APZ42_027591	A0A162QXL0	A0A0P5ZT82	Putative Achaete-scute.	Extra macrochaetae-like protein.	0.423
APZ42_015061	APZ42_002871	A0A162P4U5	A0A164HZG8	Helix-loop-helix delilah-like protein.	Uncharacterized protein.	0.650
APZ42_015061	APZ42_023386	A0A162P4U5	A0A164UZQ6	Helix-loop-helix delilah-like protein.	Putative Daughterless protein.	0.650