STRINGSTRING
APZ42_015607 APZ42_015607 APZ42_014832 APZ42_014832 APZ42_012308 APZ42_012308 APZ42_012330 APZ42_012330 APZ42_030682 APZ42_030682 APZ42_025866 APZ42_025866 APZ42_018099 APZ42_018099
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_015607N-terminal asparagine amidohydrolase protein. (309 aa)
APZ42_014832E3 ubiquitin-protein ligase HECTD1. (3106 aa)
APZ42_012308E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1433 aa)
APZ42_012330E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (580 aa)
APZ42_030682Protein N-terminal asparagine amidohydrolase. (343 aa)
APZ42_025866Nt_Gln_amidase domain-containing protein. (142 aa)
APZ42_018099Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family. (388 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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