(35 nodes) Calycin, and Cytoskeletal regulatory protein binding network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_019454	Prostaglandin-H2 D-isomerase; Belongs to the calycin superfamily. Lipocalin family. (191 aa)
	APZ42_016680	Apolipoprotein d; Belongs to the calycin superfamily. Lipocalin family. (211 aa)
	APZ42_033713	Coiled-coil domain-containing protein 28B. (188 aa)
	APZ42_025519	5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (117 aa)
	APZ42_022950	Ninjurin C. (194 aa)
	APZ42_011578	Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family. (296 aa)
	APZ42_019458	Putative Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
	APZ42_030947	Failed axon connections. (391 aa)
	APZ42_032160	Prostaglandin-H2 D-isomerase. (252 aa)
	APZ42_009064	Putative MON2 protein. (110 aa)
	APZ42_020314	FSA_C domain-containing protein. (3620 aa)
	APZ42_019448	Putative Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (192 aa)
	APZ42_026829	Lipocln_cytosolic_FA-bd_dom domain-containing protein. (128 aa)
	APZ42_025796	MON2 protein. (777 aa)
	APZ42_014108	Putative Allantoicase. (409 aa)
	APZ42_009987	MON2 protein. (89 aa)
	APZ42_004203	MON2 protein. (88 aa)
	APZ42_000189	Putative MON2 protein. (70 aa)
	APZ42_030252	Dopey_N domain-containing protein. (2215 aa)
	APZ42_024497	Amidohydro-rel domain-containing protein. (468 aa)
	APZ42_023350	MON2 protein. (808 aa)
	APZ42_022288	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (227 aa)
	APZ42_021866	MON2 protein. (61 aa)
	APZ42_021712	OHCU_decarbox domain-containing protein. (99 aa)
	APZ42_021249	Lipocln_cytosolic_FA-bd_dom domain-containing protein. (87 aa)
	APZ42_020798	Uncharacterized protein. (163 aa)
	APZ42_019461	Neural lazarillo. (281 aa)
	APZ42_019451	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (191 aa)
	APZ42_019136	OHCU_decarbox domain-containing protein. (159 aa)
	APZ42_018587	Uncharacterized protein. (1350 aa)
	APZ42_017689	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (200 aa)
	APZ42_016814	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (205 aa)
	APZ42_016927	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (226 aa)
	APZ42_016912	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (193 aa)
	APZ42_016906	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (205 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000189	APZ42_023350	A0A164JUT9	A0A164V118	Putative MON2 protein.	MON2 protein.	0.451
APZ42_000189	APZ42_030252	A0A164JUT9	A0A164NWD9	Putative MON2 protein.	Dopey_N domain-containing protein.	0.760
APZ42_004203	APZ42_023350	A0A164H7H9	A0A164V118	MON2 protein.	MON2 protein.	0.453
APZ42_004203	APZ42_025796	A0A164H7H9	A0A162EEN8	MON2 protein.	MON2 protein.	0.415
APZ42_004203	APZ42_030252	A0A164H7H9	A0A164NWD9	MON2 protein.	Dopey_N domain-containing protein.	0.760
APZ42_009064	APZ42_023350	A0A162BRF0	A0A164V118	Putative MON2 protein.	MON2 protein.	0.463
APZ42_009064	APZ42_025796	A0A162BRF0	A0A162EEN8	Putative MON2 protein.	MON2 protein.	0.405
APZ42_009064	APZ42_030252	A0A162BRF0	A0A164NWD9	Putative MON2 protein.	Dopey_N domain-containing protein.	0.760
APZ42_009987	APZ42_023350	A0A164DMU1	A0A164V118	MON2 protein.	MON2 protein.	0.484
APZ42_009987	APZ42_025796	A0A164DMU1	A0A162EEN8	MON2 protein.	MON2 protein.	0.440
APZ42_009987	APZ42_030252	A0A164DMU1	A0A164NWD9	MON2 protein.	Dopey_N domain-containing protein.	0.760
APZ42_011578	APZ42_014108	A0A0P5Z5X8	A0A162Q061	Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.	Putative Allantoicase.	0.828
APZ42_011578	APZ42_024497	A0A0P5Z5X8	A0A164TY02	Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.	Amidohydro-rel domain-containing protein.	0.928
APZ42_011578	APZ42_025519	A0A0P5Z5X8	A0A0P5SM03	Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.	5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.	0.960
APZ42_014108	APZ42_011578	A0A162Q061	A0A0P5Z5X8	Putative Allantoicase.	Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.	0.828
APZ42_014108	APZ42_024497	A0A162Q061	A0A164TY02	Putative Allantoicase.	Amidohydro-rel domain-containing protein.	0.992
APZ42_014108	APZ42_025519	A0A162Q061	A0A0P5SM03	Putative Allantoicase.	5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.	0.863
APZ42_016680	APZ42_017689	A0A0P4X2K0	A0A165A0I1	Apolipoprotein d; Belongs to the calycin superfamily. Lipocalin family.	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family.	0.502
APZ42_016680	APZ42_019448	A0A0P4X2K0	A0A162CES1	Apolipoprotein d; Belongs to the calycin superfamily. Lipocalin family.	Putative Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family.	0.501
APZ42_016680	APZ42_019454	A0A0P4X2K0	A0A0N8C5H6	Apolipoprotein d; Belongs to the calycin superfamily. Lipocalin family.	Prostaglandin-H2 D-isomerase; Belongs to the calycin superfamily. Lipocalin family.	0.458