STRINGSTRING
APZ42_019270 APZ42_019270 APZ42_019580 APZ42_019580 APZ42_013220 APZ42_013220 APZ42_031744 APZ42_031744 EOG090X0JP1 EOG090X0JP1 APZ42_006544 APZ42_006544 APZ42_006396 APZ42_006396 APZ42_032633 APZ42_032633 APZ42_031955 APZ42_031955 APZ42_030527 APZ42_030527 APZ42_024911 APZ42_024911 APZ42_021218 APZ42_021218 APZ42_017612 APZ42_017612
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_019270Von Hippel-Lindau disease tumor suppressor. (187 aa)
APZ42_019580Transcription elongation factor B Polypeptide 1; Belongs to the SKP1 family. (114 aa)
APZ42_013220Leucine-rich repeat protein 1. (405 aa)
APZ42_031744RING-box protein 2. (115 aa)
EOG090X0JP1Transcription elongation factor B polypeptide 2. (120 aa)
APZ42_006544Cullin-5; Belongs to the cullin family. (104 aa)
APZ42_006396Cullin-5; Belongs to the cullin family. (280 aa)
APZ42_032633RING-box protein 1A. (116 aa)
APZ42_031955Cullin-2; Belongs to the cullin family. (754 aa)
APZ42_030527Uncharacterized protein. (399 aa)
APZ42_024911Cullin-5; Belongs to the cullin family. (496 aa)
APZ42_021218Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (257 aa)
APZ42_017612RBR-type E3 ubiquitin transferase. (453 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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