26 items (Daphnia magna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_018799	F-box/LRR-repeat protein. (631 aa)
	APZ42_017196	Uncharacterized protein. (485 aa)
	APZ42_029764	F-box/WD repeat-containing protein 1A. (510 aa)
	APZ42_017873	F-box/WD repeat-containing protein 1A. (775 aa)
	APZ42_016484	Cullin-3; Belongs to the cullin family. (771 aa)
	APZ42_030815	F-box/LRR-repeat protein. (260 aa)
	APZ42_031342	Putative F-box/LRR-repeat protein 7. (631 aa)
	APZ42_011771	WD_REPEATS_REGION domain-containing protein. (493 aa)
	APZ42_029331	ANK_REP_REGION domain-containing protein. (818 aa)
	APZ42_014874	Proteasome inhibitor PI31 subunit. (265 aa)
	EOG090X05GA	F-box/LRR-repeat protein 14. (429 aa)
	APZ42_031391	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
	APZ42_017107	F-box/WD repeat-containing protein 1A. (523 aa)
	APZ42_032885	F-box domain-containing protein. (183 aa)
	APZ42_026488	Cullin-associated NEDD8-dissociated protein 1. (1258 aa)
	APZ42_013695	SREBP cleavage activating protein. (1312 aa)
	APZ42_012143	JmjC domain-containing Histone demethylation protein 1. (874 aa)
	APZ42_033767	Putative Ankyrin repeat and SOCS box protein 3. (1585 aa)
	APZ42_032079	F-box domain-containing protein. (447 aa)
	APZ42_030322	WD_REPEATS_REGION domain-containing protein. (344 aa)
	APZ42_029781	F-box domain-containing protein. (442 aa)
	APZ42_029058	Putative Ankyrin repeat domain-containing protein 50. (1629 aa)
	APZ42_026554	Uncharacterized protein. (462 aa)
	APZ42_022461	Cyclin F box-like protein 7. (479 aa)
	APZ42_017914	Cullin-5; Belongs to the cullin family. (779 aa)
	APZ42_016504	F-box only protein 2. (276 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011771	APZ42_012143	A0A0P5UNX2	A0A162S5W6	WD_REPEATS_REGION domain-containing protein.	JmjC domain-containing Histone demethylation protein 1.	0.469
APZ42_011771	APZ42_013695	A0A0P5UNX2	A0A162QRQ1	WD_REPEATS_REGION domain-containing protein.	SREBP cleavage activating protein.	0.632
APZ42_011771	APZ42_016484	A0A0P5UNX2	A0A0P5QRU8	WD_REPEATS_REGION domain-containing protein.	Cullin-3; Belongs to the cullin family.	0.827
APZ42_011771	APZ42_016504	A0A0P5UNX2	A0A165AGW5	WD_REPEATS_REGION domain-containing protein.	F-box only protein 2.	0.582
APZ42_011771	APZ42_017107	A0A0P5UNX2	A0A162CKW2	WD_REPEATS_REGION domain-containing protein.	F-box/WD repeat-containing protein 1A.	0.633
APZ42_011771	APZ42_017873	A0A0P5UNX2	A0A0P5MYY1	WD_REPEATS_REGION domain-containing protein.	F-box/WD repeat-containing protein 1A.	0.632
APZ42_011771	APZ42_017914	A0A0P5UNX2	A0A164ZF56	WD_REPEATS_REGION domain-containing protein.	Cullin-5; Belongs to the cullin family.	0.864
APZ42_011771	APZ42_018799	A0A0P5UNX2	A0A0N8AR27	WD_REPEATS_REGION domain-containing protein.	F-box/LRR-repeat protein.	0.500
APZ42_011771	APZ42_022461	A0A0P5UNX2	A0A164VJW1	WD_REPEATS_REGION domain-containing protein.	Cyclin F box-like protein 7.	0.576
APZ42_011771	APZ42_026488	A0A0P5UNX2	A0A162EDG7	WD_REPEATS_REGION domain-containing protein.	Cullin-associated NEDD8-dissociated protein 1.	0.475
APZ42_011771	APZ42_026554	A0A0P5UNX2	A0A164S5C9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.553
APZ42_011771	APZ42_029058	A0A0P5UNX2	A0A164PYG1	WD_REPEATS_REGION domain-containing protein.	Putative Ankyrin repeat domain-containing protein 50.	0.553
APZ42_011771	APZ42_029331	A0A0P5UNX2	A0A0P5V7Z5	WD_REPEATS_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.553
APZ42_011771	APZ42_031342	A0A0P5UNX2	A0A0P5T7K9	WD_REPEATS_REGION domain-containing protein.	Putative F-box/LRR-repeat protein 7.	0.500
APZ42_011771	APZ42_031391	A0A0P5UNX2	A0A0P6ESR7	WD_REPEATS_REGION domain-containing protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.864
APZ42_011771	APZ42_033767	A0A0P5UNX2	A0A164KWH0	WD_REPEATS_REGION domain-containing protein.	Putative Ankyrin repeat and SOCS box protein 3.	0.553
APZ42_011771	EOG090X05GA	A0A0P5UNX2	A0A0P6DJR4	WD_REPEATS_REGION domain-containing protein.	F-box/LRR-repeat protein 14.	0.524
APZ42_012143	APZ42_011771	A0A162S5W6	A0A0P5UNX2	JmjC domain-containing Histone demethylation protein 1.	WD_REPEATS_REGION domain-containing protein.	0.469
APZ42_012143	APZ42_013695	A0A162S5W6	A0A162QRQ1	JmjC domain-containing Histone demethylation protein 1.	SREBP cleavage activating protein.	0.526
APZ42_012143	APZ42_016484	A0A162S5W6	A0A0P5QRU8	JmjC domain-containing Histone demethylation protein 1.	Cullin-3; Belongs to the cullin family.	0.997