10 items (Daphnia magna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_029764	F-box/WD repeat-containing protein 1A. (510 aa)
	APZ42_017873	F-box/WD repeat-containing protein 1A. (775 aa)
	APZ42_016484	Cullin-3; Belongs to the cullin family. (771 aa)
	APZ42_031391	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
	APZ42_017107	F-box/WD repeat-containing protein 1A. (523 aa)
	APZ42_026488	Cullin-associated NEDD8-dissociated protein 1. (1258 aa)
	APZ42_013695	SREBP cleavage activating protein. (1312 aa)
	APZ42_012143	JmjC domain-containing Histone demethylation protein 1. (874 aa)
	APZ42_017914	Cullin-5; Belongs to the cullin family. (779 aa)
	APZ42_016504	F-box only protein 2. (276 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_012143	APZ42_013695	A0A162S5W6	A0A162QRQ1	JmjC domain-containing Histone demethylation protein 1.	SREBP cleavage activating protein.	0.526
APZ42_012143	APZ42_016484	A0A162S5W6	A0A0P5QRU8	JmjC domain-containing Histone demethylation protein 1.	Cullin-3; Belongs to the cullin family.	0.997
APZ42_012143	APZ42_016504	A0A162S5W6	A0A165AGW5	JmjC domain-containing Histone demethylation protein 1.	F-box only protein 2.	0.505
APZ42_012143	APZ42_017107	A0A162S5W6	A0A162CKW2	JmjC domain-containing Histone demethylation protein 1.	F-box/WD repeat-containing protein 1A.	0.525
APZ42_012143	APZ42_017873	A0A162S5W6	A0A0P5MYY1	JmjC domain-containing Histone demethylation protein 1.	F-box/WD repeat-containing protein 1A.	0.526
APZ42_012143	APZ42_017914	A0A162S5W6	A0A164ZF56	JmjC domain-containing Histone demethylation protein 1.	Cullin-5; Belongs to the cullin family.	0.997
APZ42_012143	APZ42_026488	A0A162S5W6	A0A162EDG7	JmjC domain-containing Histone demethylation protein 1.	Cullin-associated NEDD8-dissociated protein 1.	0.980
APZ42_012143	APZ42_029764	A0A162S5W6	A0A0P4WPW7	JmjC domain-containing Histone demethylation protein 1.	F-box/WD repeat-containing protein 1A.	0.469
APZ42_012143	APZ42_031391	A0A162S5W6	A0A0P6ESR7	JmjC domain-containing Histone demethylation protein 1.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.999
APZ42_013695	APZ42_012143	A0A162QRQ1	A0A162S5W6	SREBP cleavage activating protein.	JmjC domain-containing Histone demethylation protein 1.	0.526
APZ42_013695	APZ42_016484	A0A162QRQ1	A0A0P5QRU8	SREBP cleavage activating protein.	Cullin-3; Belongs to the cullin family.	0.938
APZ42_013695	APZ42_016504	A0A162QRQ1	A0A165AGW5	SREBP cleavage activating protein.	F-box only protein 2.	0.764
APZ42_013695	APZ42_017107	A0A162QRQ1	A0A162CKW2	SREBP cleavage activating protein.	F-box/WD repeat-containing protein 1A.	0.733
APZ42_013695	APZ42_017914	A0A162QRQ1	A0A164ZF56	SREBP cleavage activating protein.	Cullin-5; Belongs to the cullin family.	0.946
APZ42_013695	APZ42_026488	A0A162QRQ1	A0A162EDG7	SREBP cleavage activating protein.	Cullin-associated NEDD8-dissociated protein 1.	0.688
APZ42_013695	APZ42_029764	A0A162QRQ1	A0A0P4WPW7	SREBP cleavage activating protein.	F-box/WD repeat-containing protein 1A.	0.632
APZ42_013695	APZ42_031391	A0A162QRQ1	A0A0P6ESR7	SREBP cleavage activating protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.986
APZ42_016484	APZ42_012143	A0A0P5QRU8	A0A162S5W6	Cullin-3; Belongs to the cullin family.	JmjC domain-containing Histone demethylation protein 1.	0.997
APZ42_016484	APZ42_013695	A0A0P5QRU8	A0A162QRQ1	Cullin-3; Belongs to the cullin family.	SREBP cleavage activating protein.	0.938
APZ42_016484	APZ42_016504	A0A0P5QRU8	A0A165AGW5	Cullin-3; Belongs to the cullin family.	F-box only protein 2.	0.756