(16 nodes) Mixed, incl. Subtilase family, and Positive regulation of miRNA-mediated gene silencing network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_020548	Proprotein convertase subtilisin/kexin type; Belongs to the peptidase S8 family. (1260 aa)
	APZ42_022697	RING finger protein 11. (169 aa)
	APZ42_029897	Death domain protein. (387 aa)
	APZ42_023445	RING finger protein. (461 aa)
	APZ42_024557	E3 ubiquitin-protein ligase RNF103. (435 aa)
	APZ42_024680	Proprotein convertase subtilisin/kexin type. (560 aa)
	APZ42_015225	Putative E3 ubiquitin-protein ligase RNF181. (823 aa)
	APZ42_001190	annotation not available (223 aa)
	APZ42_032776	Amontillado; Belongs to the peptidase S8 family. (797 aa)
	APZ42_030950	Amontillado; Belongs to the peptidase S8 family. (842 aa)
	APZ42_027336	E3 ubiquitin-protein ligase RNF115. (224 aa)
	APZ42_020549	LYR motif-containing protein 4; Belongs to the complex I LYR family. (842 aa)
	APZ42_019735	Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family. (755 aa)
	APZ42_018550	Tripeptidyl-peptidase 2. (1276 aa)
	APZ42_018170	Putative E3 ubiquitin-protein ligase RNF115. (216 aa)
	APZ42_018067	LRRCT domain-containing protein. (380 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001190	APZ42_015225	A0A164J4H5	A0A162PAG1	annotation not available	Putative E3 ubiquitin-protein ligase RNF181.	0.421
APZ42_001190	APZ42_018067	A0A164J4H5	A0A164ZDJ2	annotation not available	LRRCT domain-containing protein.	0.567
APZ42_001190	APZ42_018170	A0A164J4H5	A0A164ZAV8	annotation not available	Putative E3 ubiquitin-protein ligase RNF115.	0.421
APZ42_001190	APZ42_018550	A0A164J4H5	A0A164Z0H6	annotation not available	Tripeptidyl-peptidase 2.	0.605
APZ42_001190	APZ42_020548	A0A164J4H5	A0A0N8D9Y9	annotation not available	Proprotein convertase subtilisin/kexin type; Belongs to the peptidase S8 family.	0.611
APZ42_001190	APZ42_020549	A0A164J4H5	A0A164X8E9	annotation not available	LYR motif-containing protein 4; Belongs to the complex I LYR family.	0.611
APZ42_001190	APZ42_022697	A0A164J4H5	A0A0P5VBG1	annotation not available	RING finger protein 11.	0.421
APZ42_001190	APZ42_023445	A0A164J4H5	A0A0P5Z6D6	annotation not available	RING finger protein.	0.421
APZ42_001190	APZ42_024557	A0A164J4H5	A0A0P5Z871	annotation not available	E3 ubiquitin-protein ligase RNF103.	0.421
APZ42_001190	APZ42_024680	A0A164J4H5	A0A0P5ZKP3	annotation not available	Proprotein convertase subtilisin/kexin type.	0.611
APZ42_001190	APZ42_027336	A0A164J4H5	A0A164RHT7	annotation not available	E3 ubiquitin-protein ligase RNF115.	0.421
APZ42_001190	APZ42_030950	A0A164J4H5	A0A164N7H8	annotation not available	Amontillado; Belongs to the peptidase S8 family.	0.611
APZ42_001190	APZ42_032776	A0A164J4H5	A0A164LVR4	annotation not available	Amontillado; Belongs to the peptidase S8 family.	0.611
APZ42_015225	APZ42_001190	A0A162PAG1	A0A164J4H5	Putative E3 ubiquitin-protein ligase RNF181.	annotation not available	0.421
APZ42_015225	APZ42_018550	A0A162PAG1	A0A164Z0H6	Putative E3 ubiquitin-protein ligase RNF181.	Tripeptidyl-peptidase 2.	0.706
APZ42_015225	APZ42_019735	A0A162PAG1	A0A164XNT7	Putative E3 ubiquitin-protein ligase RNF181.	Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.703
APZ42_015225	APZ42_020548	A0A162PAG1	A0A0N8D9Y9	Putative E3 ubiquitin-protein ligase RNF181.	Proprotein convertase subtilisin/kexin type; Belongs to the peptidase S8 family.	0.709
APZ42_015225	APZ42_020549	A0A162PAG1	A0A164X8E9	Putative E3 ubiquitin-protein ligase RNF181.	LYR motif-containing protein 4; Belongs to the complex I LYR family.	0.709
APZ42_015225	APZ42_024680	A0A162PAG1	A0A0P5ZKP3	Putative E3 ubiquitin-protein ligase RNF181.	Proprotein convertase subtilisin/kexin type.	0.709
APZ42_015225	APZ42_029897	A0A162PAG1	A0A0P5VJ13	Putative E3 ubiquitin-protein ligase RNF181.	Death domain protein.	0.421