STRINGSTRING
APZ42_014819 APZ42_014819 APZ42_006120 APZ42_006120 APZ42_004663 APZ42_004663 EOG090X06NC EOG090X06NC APZ42_017650 APZ42_017650 APZ42_019142 APZ42_019142 APZ42_005183 APZ42_005183 APZ42_011712 APZ42_011712 APZ42_005184 APZ42_005184 APZ42_004607 APZ42_004607 APZ42_011260 APZ42_011260 APZ42_008919 APZ42_008919 APZ42_006167 APZ42_006167 APZ42_006121 APZ42_006121 APZ42_004083 APZ42_004083 APZ42_029135 APZ42_029135 APZ42_028144 APZ42_028144 APZ42_023810 APZ42_023810 APZ42_023887 APZ42_023887 APZ42_023928 APZ42_023928 APZ42_024128 APZ42_024128
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_014819Nuclear autoantigenic sperm protein. (552 aa)
APZ42_006120Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_004663Nucleosome assembly protein 1 1; Belongs to the nucleosome assembly protein (NAP) family. (397 aa)
EOG090X06NCHistone acetyltransferase type B catalytic subunit. (408 aa)
APZ42_017650Histone-binding protein RBBP4. (428 aa)
APZ42_019142Histone H2A; Belongs to the histone H2A family. (141 aa)
APZ42_005183Histone H2A; Belongs to the histone H2A family. (126 aa)
APZ42_011712Histone H2B; Belongs to the histone H2B family. (129 aa)
APZ42_005184Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_004607Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
APZ42_011260Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (381 aa)
APZ42_008919JmjC domain-containing protein. (101 aa)
APZ42_006167Histone H2A; Belongs to the histone H2A family. (126 aa)
APZ42_006121Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_004083Histone H3.3. (108 aa)
APZ42_029135Histone H2A; Belongs to the histone H2A family. (132 aa)
APZ42_028144Histone H2A; Belongs to the histone H2A family. (164 aa)
APZ42_023810Histone H3.2. (156 aa)
APZ42_023887Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (146 aa)
APZ42_023928Histone H3; Belongs to the histone H3 family. (150 aa)
APZ42_024128Histone H3.2. (170 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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