(59 nodes) INO80-type complex, and Zinc finger C2H2 superfamily network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_033166	Zinc finger-like protein. (324 aa)
	APZ42_013406	Zinc finger protein OZF. (543 aa)
	APZ42_014202	BTB domain-containing protein. (254 aa)
	APZ42_020013	Putative Zinc finger protein 302. (500 aa)
	APZ42_022071	Uncharacterized protein. (549 aa)
	APZ42_018621	Zinc finger and BTB domain-containing protein. (569 aa)
	APZ42_014175	Krueppel factor 13. (308 aa)
	APZ42_014159	Putative Zinc finger protein 780B. (637 aa)
	APZ42_013140	Putative Zinc finger and SCAN domain-containing protein 32. (416 aa)
	APZ42_032746	Suppressor of fused homolog. (471 aa)
	APZ42_024205	Krueppel factor 11. (481 aa)
	APZ42_024447	Putative INO80 complex subunit B. (390 aa)
	APZ42_012783	KLF-15/D-BTEB2-like protein. (454 aa)
	APZ42_018850	Gram-negative binding protein gnbp. (395 aa)
	APZ42_022070	Zinc finger and SCAN domain-containing protein. (776 aa)
	APZ42_015611	Kinesin costa-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1299 aa)
	APZ42_016007	Zinc finger and BTB domain-containing protein 26. (592 aa)
	APZ42_019982	Btb/poz domain-containing protein. (322 aa)
	APZ42_027196	Zinc finger protein 69. (748 aa)
	APZ42_021807	DNA helicase INO80. (1584 aa)
	APZ42_025566	Putative Serine/threonine-protein kinase fused. (736 aa)
	APZ42_017802	Krueppel-related zinc finger protein. (812 aa)
	APZ42_012246	Hydrogen peroxide stress regulator. (751 aa)
	APZ42_005073	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (275 aa)
	APZ42_000038	Nfrkb-like protein. (165 aa)
	APZ42_030992	Cubitus interruptus-like protein. (1531 aa)
	APZ42_016158	Putative Zinc finger protein 235. (374 aa)
	APZ42_014173	Uncharacterized protein. (563 aa)
	APZ42_014296	Actin-related protein 5; Belongs to the actin family. (666 aa)
	APZ42_014099	Uncharacterized protein. (83 aa)
	APZ42_013900	Zinc finger-like protein. (432 aa)
	APZ42_013407	Zinc finger protein 689. (451 aa)
	APZ42_013281	Putative Zinc finger protein 740. (378 aa)
	APZ42_013188	Tra-1-like protein. (469 aa)
	APZ42_012400	PR domain zinc finger protein 1. (414 aa)
	APZ42_012360	Uncharacterized protein. (326 aa)
	APZ42_011199	Uncharacterized protein. (777 aa)
	APZ42_011378	Putative Zinc finger protein 652. (784 aa)
	APZ42_011793	Uncharacterized protein. (2828 aa)
	APZ42_011074	Uncharacterized protein. (952 aa)
	APZ42_002887	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (91 aa)
	APZ42_001841	cGMP-dependent protein kinase. (330 aa)
	APZ42_034340	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1054 aa)
	APZ42_033096	Putative B-cell CLL/lymphoma 6 member B protein. (765 aa)
	APZ42_032908	Putative Falls into Kruppel clade in ML phylogeny. (908 aa)
	APZ42_031872	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (433 aa)
	APZ42_030752	Krueppel factor 4/sw-like protein. (750 aa)
	APZ42_030808	Uncharacterized protein. (222 aa)
	APZ42_030271	Zinc finger protein 696. (400 aa)
	APZ42_028093	Uncharacterized protein. (619 aa)
	APZ42_027304	Putative Zinc finger protein 175. (747 aa)
	APZ42_024960	Uncharacterized protein. (166 aa)
	APZ42_024810	BTB domain-containing protein. (399 aa)
	APZ42_023978	Uncharacterized protein. (303 aa)
	APZ42_022284	NFRKB_winged domain-containing protein. (1336 aa)
	APZ42_021273	Putative Lymphoid-restricted membrane protein/sw. (380 aa)
	APZ42_020522	Uncharacterized protein. (463 aa)
	APZ42_018800	Zinc finger and BTB domain-containing 45-like protein. (229 aa)
	APZ42_016426	Zinc finger 174-like protein. (214 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000038	APZ42_002887	A0A162CA68	A0A164HZ47	Nfrkb-like protein.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.884
APZ42_000038	APZ42_005073	A0A162CA68	A0A162BZ26	Nfrkb-like protein.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.884
APZ42_000038	APZ42_011199	A0A162CA68	A0A162SH43	Nfrkb-like protein.	Uncharacterized protein.	0.756
APZ42_000038	APZ42_011793	A0A162CA68	A0A162T115	Nfrkb-like protein.	Uncharacterized protein.	0.941
APZ42_000038	APZ42_014296	A0A162CA68	A0A162Q701	Nfrkb-like protein.	Actin-related protein 5; Belongs to the actin family.	0.981
APZ42_000038	APZ42_018850	A0A162CA68	A0A0P5UML4	Nfrkb-like protein.	Gram-negative binding protein gnbp.	0.400
APZ42_000038	APZ42_021807	A0A162CA68	A0A0P5YZM7	Nfrkb-like protein.	DNA helicase INO80.	0.735
APZ42_000038	APZ42_022284	A0A162CA68	A0A164VDG6	Nfrkb-like protein.	NFRKB_winged domain-containing protein.	0.443
APZ42_000038	APZ42_023978	A0A162CA68	A0A164UBU2	Nfrkb-like protein.	Uncharacterized protein.	0.597
APZ42_000038	APZ42_024447	A0A162CA68	A0A0P5SN89	Nfrkb-like protein.	Putative INO80 complex subunit B.	0.837
APZ42_000038	APZ42_030808	A0A162CA68	A0A164NC34	Nfrkb-like protein.	Uncharacterized protein.	0.887
APZ42_000038	APZ42_031872	A0A162CA68	A0A164MDA0	Nfrkb-like protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.576
APZ42_001841	APZ42_013188	A0A164IPQ6	A0A162R3H3	cGMP-dependent protein kinase.	Tra-1-like protein.	0.586
APZ42_001841	APZ42_015611	A0A164IPQ6	A0A0P5VTG7	cGMP-dependent protein kinase.	Kinesin costa-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.544
APZ42_001841	APZ42_021273	A0A164IPQ6	A0A164WTL0	cGMP-dependent protein kinase.	Putative Lymphoid-restricted membrane protein/sw.	0.692
APZ42_001841	APZ42_024960	A0A164IPQ6	A0A164TL76	cGMP-dependent protein kinase.	Uncharacterized protein.	0.521
APZ42_001841	APZ42_030992	A0A164IPQ6	A0A162DCH9	cGMP-dependent protein kinase.	Cubitus interruptus-like protein.	0.586
APZ42_001841	APZ42_034340	A0A164IPQ6	A0A164K3P3	cGMP-dependent protein kinase.	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.581
APZ42_002887	APZ42_000038	A0A164HZ47	A0A162CA68	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	Nfrkb-like protein.	0.884
APZ42_002887	APZ42_005073	A0A164HZ47	A0A162BZ26	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.723