(14 nodes) Mixed, incl. NHL repeat, and STING mediated induction of host immune responses network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_029287	Nhl ring finger b-box coiled coil domain containing family member nhl-3. (714 aa)
	APZ42_032373	B-box type zinc finger protein ncl-1. (988 aa)
	APZ42_002291	Putative Zinc finger protein squeeze. (434 aa)
	APZ42_014960	Putative G-protein coupled receptor 139. (497 aa)
	EOG090X01W2	Brain tumor-like protein. (935 aa)
	APZ42_027187	Tripartite motif-containing protein 2. (1563 aa)
	APZ42_026299	Uncharacterized protein. (649 aa)
	APZ42_025676	ATP-dependent RNA Helicase abstrakt. (245 aa)
	APZ42_022691	RING-type domain-containing protein. (523 aa)
	APZ42_021270	ATP-dependent RNA Helicase abstrakt. (386 aa)
	APZ42_020421	Protein wech. (844 aa)
	APZ42_019816	Putative Sarcomere length short. (685 aa)
	APZ42_019922	Zinc finger 813-like protein. (424 aa)
	APZ42_017663	PPIase cyclophilin-type domain-containing protein. (501 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002291	APZ42_017663	A0A162D2G8	A0A164ZZW8	Putative Zinc finger protein squeeze.	PPIase cyclophilin-type domain-containing protein.	0.592
APZ42_002291	APZ42_020421	A0A162D2G8	A0A164XH13	Putative Zinc finger protein squeeze.	Protein wech.	0.592
APZ42_002291	APZ42_022691	A0A162D2G8	A0A164VQE3	Putative Zinc finger protein squeeze.	RING-type domain-containing protein.	0.592
APZ42_002291	APZ42_027187	A0A162D2G8	A0A164RD41	Putative Zinc finger protein squeeze.	Tripartite motif-containing protein 2.	0.592
APZ42_002291	APZ42_029287	A0A162D2G8	A0A0N8D632	Putative Zinc finger protein squeeze.	Nhl ring finger b-box coiled coil domain containing family member nhl-3.	0.592
APZ42_002291	APZ42_032373	A0A162D2G8	A0A0P5AHJ4	Putative Zinc finger protein squeeze.	B-box type zinc finger protein ncl-1.	0.592
APZ42_002291	EOG090X01W2	A0A162D2G8	A0A162SFW8	Putative Zinc finger protein squeeze.	Brain tumor-like protein.	0.592
APZ42_014960	APZ42_032373	A0A162P2J3	A0A0P5AHJ4	Putative G-protein coupled receptor 139.	B-box type zinc finger protein ncl-1.	0.529
APZ42_014960	EOG090X01W2	A0A162P2J3	A0A162SFW8	Putative G-protein coupled receptor 139.	Brain tumor-like protein.	0.459
APZ42_017663	APZ42_002291	A0A164ZZW8	A0A162D2G8	PPIase cyclophilin-type domain-containing protein.	Putative Zinc finger protein squeeze.	0.592
APZ42_017663	APZ42_021270	A0A164ZZW8	A0A164WTL9	PPIase cyclophilin-type domain-containing protein.	ATP-dependent RNA Helicase abstrakt.	0.583
APZ42_017663	APZ42_025676	A0A164ZZW8	A0A164SV21	PPIase cyclophilin-type domain-containing protein.	ATP-dependent RNA Helicase abstrakt.	0.583
APZ42_017663	APZ42_026299	A0A164ZZW8	A0A164SCQ9	PPIase cyclophilin-type domain-containing protein.	Uncharacterized protein.	0.592
APZ42_019816	APZ42_027187	A0A164XQU3	A0A164RD41	Putative Sarcomere length short.	Tripartite motif-containing protein 2.	0.480
APZ42_019816	APZ42_029287	A0A164XQU3	A0A0N8D632	Putative Sarcomere length short.	Nhl ring finger b-box coiled coil domain containing family member nhl-3.	0.480
APZ42_020421	APZ42_002291	A0A164XH13	A0A162D2G8	Protein wech.	Putative Zinc finger protein squeeze.	0.592
APZ42_020421	APZ42_021270	A0A164XH13	A0A164WTL9	Protein wech.	ATP-dependent RNA Helicase abstrakt.	0.583
APZ42_020421	APZ42_025676	A0A164XH13	A0A164SV21	Protein wech.	ATP-dependent RNA Helicase abstrakt.	0.583
APZ42_020421	APZ42_026299	A0A164XH13	A0A164SCQ9	Protein wech.	Uncharacterized protein.	0.592
APZ42_021270	APZ42_017663	A0A164WTL9	A0A164ZZW8	ATP-dependent RNA Helicase abstrakt.	PPIase cyclophilin-type domain-containing protein.	0.583