(6 nodes) RISC-loading complex network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_026328	Loquacious. (360 aa)
	APZ42_012837	Protein argonaute-1. (925 aa)
	APZ42_009511	Dicer dsRNA-binding fold domain-containing protein. (310 aa)
	APZ42_002652	Putative Endoribonuclease Dcr-1. (263 aa)
	APZ42_031073	Putative Double-stranded RNA-binding protein Staufen. (542 aa)
	APZ42_025393	Endoribonuclease Dcr-1. (1807 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002652	APZ42_012837	A0A164I4P4	A0A162RFB0	Putative Endoribonuclease Dcr-1.	Protein argonaute-1.	0.818
APZ42_002652	APZ42_026328	A0A164I4P4	A0A162EDQ7	Putative Endoribonuclease Dcr-1.	Loquacious.	0.867
APZ42_002652	APZ42_031073	A0A164I4P4	A0A164N5G2	Putative Endoribonuclease Dcr-1.	Putative Double-stranded RNA-binding protein Staufen.	0.717
APZ42_009511	APZ42_012837	A0A164DYT8	A0A162RFB0	Dicer dsRNA-binding fold domain-containing protein.	Protein argonaute-1.	0.818
APZ42_009511	APZ42_026328	A0A164DYT8	A0A162EDQ7	Dicer dsRNA-binding fold domain-containing protein.	Loquacious.	0.867
APZ42_009511	APZ42_031073	A0A164DYT8	A0A164N5G2	Dicer dsRNA-binding fold domain-containing protein.	Putative Double-stranded RNA-binding protein Staufen.	0.717
APZ42_012837	APZ42_002652	A0A162RFB0	A0A164I4P4	Protein argonaute-1.	Putative Endoribonuclease Dcr-1.	0.818
APZ42_012837	APZ42_009511	A0A162RFB0	A0A164DYT8	Protein argonaute-1.	Dicer dsRNA-binding fold domain-containing protein.	0.818
APZ42_012837	APZ42_025393	A0A162RFB0	A0A164T4F3	Protein argonaute-1.	Endoribonuclease Dcr-1.	0.872
APZ42_012837	APZ42_026328	A0A162RFB0	A0A162EDQ7	Protein argonaute-1.	Loquacious.	0.965
APZ42_012837	APZ42_031073	A0A162RFB0	A0A164N5G2	Protein argonaute-1.	Putative Double-stranded RNA-binding protein Staufen.	0.850
APZ42_025393	APZ42_012837	A0A164T4F3	A0A162RFB0	Endoribonuclease Dcr-1.	Protein argonaute-1.	0.872
APZ42_025393	APZ42_026328	A0A164T4F3	A0A162EDQ7	Endoribonuclease Dcr-1.	Loquacious.	0.991
APZ42_025393	APZ42_031073	A0A164T4F3	A0A164N5G2	Endoribonuclease Dcr-1.	Putative Double-stranded RNA-binding protein Staufen.	0.717
APZ42_026328	APZ42_002652	A0A162EDQ7	A0A164I4P4	Loquacious.	Putative Endoribonuclease Dcr-1.	0.867
APZ42_026328	APZ42_009511	A0A162EDQ7	A0A164DYT8	Loquacious.	Dicer dsRNA-binding fold domain-containing protein.	0.867
APZ42_026328	APZ42_012837	A0A162EDQ7	A0A162RFB0	Loquacious.	Protein argonaute-1.	0.965
APZ42_026328	APZ42_025393	A0A162EDQ7	A0A164T4F3	Loquacious.	Endoribonuclease Dcr-1.	0.991
APZ42_026328	APZ42_031073	A0A162EDQ7	A0A164N5G2	Loquacious.	Putative Double-stranded RNA-binding protein Staufen.	0.566
APZ42_031073	APZ42_002652	A0A164N5G2	A0A164I4P4	Putative Double-stranded RNA-binding protein Staufen.	Putative Endoribonuclease Dcr-1.	0.717