(22 nodes) Cadherin conserved site, and Catenin complex network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_023030	LIX1 protein. (266 aa)
	APZ42_022852	Protocadherin Fat. (1737 aa)
	APZ42_013410	Class b secretin g-protein coupled receptor gprcal2; Belongs to the G-protein coupled receptor 2 family. (521 aa)
	APZ42_010904	Four-jointed box protein 1. (523 aa)
	APZ42_002723	Putative Transcription coactivator armadillo. (248 aa)
	APZ42_015086	Uncharacterized protein. (791 aa)
	APZ42_014161	Cadherin 88C. (1880 aa)
	APZ42_014197	Putative Cadherin-89D. (1475 aa)
	APZ42_030261	EGF-like domain-containing protein. (129 aa)
	APZ42_029141	Cad89d. (434 aa)
	APZ42_027763	Putative Neural-cadherin 2. (4608 aa)
	APZ42_025677	Fat cadherin-related tumor suppressor-like protein. (4893 aa)
	APZ42_023440	Catenin Delta-2. (955 aa)
	APZ42_021619	Cadherin-related tumor suppressor. (653 aa)
	APZ42_021128	Cadherin 99C. (1605 aa)
	APZ42_019767	Putative Neural-cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (3245 aa)
	APZ42_019969	Tetraspan membrane protein of hair cell stereocilia. (236 aa)
	APZ42_019438	Cadherin-23. (1934 aa)
	APZ42_019314	Dachsous protein; Cadherins are calcium-dependent cell adhesion proteins. (3459 aa)
	APZ42_018830	DE-cadherin; Cadherins are calcium-dependent cell adhesion proteins. (1532 aa)
	APZ42_017014	Catenin alpha. (953 aa)
	APZ42_016346	Cadherin-23. (2094 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002723	APZ42_014161	A0A162CY37	A0A162Q1Q2	Putative Transcription coactivator armadillo.	Cadherin 88C.	0.800
APZ42_002723	APZ42_014197	A0A162CY37	A0A162Q209	Putative Transcription coactivator armadillo.	Putative Cadherin-89D.	0.800
APZ42_002723	APZ42_015086	A0A162CY37	A0A162P6D9	Putative Transcription coactivator armadillo.	Uncharacterized protein.	0.957
APZ42_002723	APZ42_016346	A0A162CY37	A0A165ADA7	Putative Transcription coactivator armadillo.	Cadherin-23.	0.800
APZ42_002723	APZ42_017014	A0A162CY37	A0A165AB65	Putative Transcription coactivator armadillo.	Catenin alpha.	0.957
APZ42_002723	APZ42_018830	A0A162CY37	A0A164YVX1	Putative Transcription coactivator armadillo.	DE-cadherin; Cadherins are calcium-dependent cell adhesion proteins.	0.800
APZ42_002723	APZ42_019314	A0A162CY37	A0A164YHC3	Putative Transcription coactivator armadillo.	Dachsous protein; Cadherins are calcium-dependent cell adhesion proteins.	0.800
APZ42_002723	APZ42_019438	A0A162CY37	A0A164Y745	Putative Transcription coactivator armadillo.	Cadherin-23.	0.800
APZ42_002723	APZ42_019767	A0A162CY37	A0A164XPT3	Putative Transcription coactivator armadillo.	Putative Neural-cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.800
APZ42_002723	APZ42_021128	A0A162CY37	A0A164X0I9	Putative Transcription coactivator armadillo.	Cadherin 99C.	0.797
APZ42_002723	APZ42_022852	A0A162CY37	A0A0P5SXY3	Putative Transcription coactivator armadillo.	Protocadherin Fat.	0.797
APZ42_002723	APZ42_023440	A0A162CY37	A0A164UXR4	Putative Transcription coactivator armadillo.	Catenin Delta-2.	0.915
APZ42_002723	APZ42_029141	A0A162CY37	A0A164PWD5	Putative Transcription coactivator armadillo.	Cad89d.	0.800
APZ42_010904	APZ42_014161	A0A0P6DVQ5	A0A162Q1Q2	Four-jointed box protein 1.	Cadherin 88C.	0.700
APZ42_010904	APZ42_014197	A0A0P6DVQ5	A0A162Q209	Four-jointed box protein 1.	Putative Cadherin-89D.	0.700
APZ42_010904	APZ42_016346	A0A0P6DVQ5	A0A165ADA7	Four-jointed box protein 1.	Cadherin-23.	0.700
APZ42_010904	APZ42_018830	A0A0P6DVQ5	A0A164YVX1	Four-jointed box protein 1.	DE-cadherin; Cadherins are calcium-dependent cell adhesion proteins.	0.700
APZ42_010904	APZ42_019314	A0A0P6DVQ5	A0A164YHC3	Four-jointed box protein 1.	Dachsous protein; Cadherins are calcium-dependent cell adhesion proteins.	0.938
APZ42_010904	APZ42_019438	A0A0P6DVQ5	A0A164Y745	Four-jointed box protein 1.	Cadherin-23.	0.700
APZ42_010904	APZ42_019767	A0A0P6DVQ5	A0A164XPT3	Four-jointed box protein 1.	Putative Neural-cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.700