5 items (Daphnia magna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_026720	LON peptidase N-terminal domain and RING finger protein. (791 aa)
	APZ42_025304	E3 ubiquitin-protein ligase HERC2. (4820 aa)
	APZ42_005834	RING-type domain-containing protein. (348 aa)
	APZ42_030747	RING-type domain-containing protein. (321 aa)
	APZ42_019114	Uncharacterized protein. (192 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_005834	APZ42_019114	A0A164G8D1	A0A164YKD9	RING-type domain-containing protein.	Uncharacterized protein.	0.535
APZ42_005834	APZ42_025304	A0A164G8D1	A0A162DDE6	RING-type domain-containing protein.	E3 ubiquitin-protein ligase HERC2.	0.782
APZ42_005834	APZ42_026720	A0A164G8D1	A0A0P4WQI9	RING-type domain-containing protein.	LON peptidase N-terminal domain and RING finger protein.	0.583
APZ42_019114	APZ42_005834	A0A164YKD9	A0A164G8D1	Uncharacterized protein.	RING-type domain-containing protein.	0.535
APZ42_019114	APZ42_026720	A0A164YKD9	A0A0P4WQI9	Uncharacterized protein.	LON peptidase N-terminal domain and RING finger protein.	0.512
APZ42_019114	APZ42_030747	A0A164YKD9	A0A164NAX7	Uncharacterized protein.	RING-type domain-containing protein.	0.535
APZ42_025304	APZ42_005834	A0A162DDE6	A0A164G8D1	E3 ubiquitin-protein ligase HERC2.	RING-type domain-containing protein.	0.782
APZ42_025304	APZ42_026720	A0A162DDE6	A0A0P4WQI9	E3 ubiquitin-protein ligase HERC2.	LON peptidase N-terminal domain and RING finger protein.	0.636
APZ42_025304	APZ42_030747	A0A162DDE6	A0A164NAX7	E3 ubiquitin-protein ligase HERC2.	RING-type domain-containing protein.	0.782
APZ42_026720	APZ42_005834	A0A0P4WQI9	A0A164G8D1	LON peptidase N-terminal domain and RING finger protein.	RING-type domain-containing protein.	0.583
APZ42_026720	APZ42_019114	A0A0P4WQI9	A0A164YKD9	LON peptidase N-terminal domain and RING finger protein.	Uncharacterized protein.	0.512
APZ42_026720	APZ42_025304	A0A0P4WQI9	A0A162DDE6	LON peptidase N-terminal domain and RING finger protein.	E3 ubiquitin-protein ligase HERC2.	0.636
APZ42_026720	APZ42_030747	A0A0P4WQI9	A0A164NAX7	LON peptidase N-terminal domain and RING finger protein.	RING-type domain-containing protein.	0.583
APZ42_030747	APZ42_019114	A0A164NAX7	A0A164YKD9	RING-type domain-containing protein.	Uncharacterized protein.	0.535
APZ42_030747	APZ42_025304	A0A164NAX7	A0A162DDE6	RING-type domain-containing protein.	E3 ubiquitin-protein ligase HERC2.	0.782
APZ42_030747	APZ42_026720	A0A164NAX7	A0A0P4WQI9	RING-type domain-containing protein.	LON peptidase N-terminal domain and RING finger protein.	0.583