STRINGSTRING
APZ42_028360 APZ42_028360 APZ42_028281 APZ42_028281 APZ42_014295 APZ42_014295 APZ42_032645 APZ42_032645 APZ42_014480 APZ42_014480 APZ42_033480 APZ42_033480 APZ42_016909 APZ42_016909 EOG090X05X9 EOG090X05X9 EOG090X07H9 EOG090X07H9 APZ42_011608 APZ42_011608 APZ42_028036 APZ42_028036 APZ42_026384 APZ42_026384 APZ42_020224 APZ42_020224 APZ42_025704 APZ42_025704 APZ42_023490 APZ42_023490 EOG090X058P EOG090X058P APZ42_026685 APZ42_026685 APZ42_023764 APZ42_023764 APZ42_023314 APZ42_023314 APZ42_029822 APZ42_029822 EOG090X09DD EOG090X09DD EOG090X02QX EOG090X02QX APZ42_012839 APZ42_012839 APZ42_017568 APZ42_017568 APZ42_020653 APZ42_020653 APZ42_012184 APZ42_012184 APZ42_017641 APZ42_017641 EOG090X0IJO EOG090X0IJO APZ42_022727 APZ42_022727 APZ42_022564 APZ42_022564 APZ42_032181 APZ42_032181 APZ42_024016 APZ42_024016 EOG090X0APJ EOG090X0APJ APZ42_033088 APZ42_033088 APZ42_013624 APZ42_013624 APZ42_012620 APZ42_012620 APZ42_030956 APZ42_030956 APZ42_017520 APZ42_017520 APZ42_027194 APZ42_027194 EOG090X05RM EOG090X05RM APZ42_016064 APZ42_016064 APZ42_017731 APZ42_017731 APZ42_029158 APZ42_029158 APZ42_018206 APZ42_018206 APZ42_026499 APZ42_026499 APZ42_015390 APZ42_015390 APZ42_012848 APZ42_012848 APZ42_023838 APZ42_023838 APZ42_012038 APZ42_012038 APZ42_016660 APZ42_016660 EOG090X0F8M EOG090X0F8M EOG090X0EWC EOG090X0EWC EOG090X0BJA EOG090X0BJA APZ42_032634 APZ42_032634 APZ42_019015 APZ42_019015 APZ42_013947 APZ42_013947 APZ42_030268 APZ42_030268 APZ42_011254 APZ42_011254 APZ42_028034 APZ42_028034 APZ42_015018 APZ42_015018 APZ42_008340 APZ42_008340 APZ42_034378 APZ42_034378 EOG090X05E6 EOG090X05E6 EOG090X05X4 EOG090X05X4 APZ42_025148 APZ42_025148 APZ42_020761 APZ42_020761 APZ42_015737 APZ42_015737 APZ42_015790 APZ42_015790 APZ42_015883 APZ42_015883 APZ42_015928 APZ42_015928 APZ42_016091 APZ42_016091 APZ42_014833 APZ42_014833 EOG090X0CWA EOG090X0CWA APZ42_015168 APZ42_015168 APZ42_015380 APZ42_015380 APZ42_015421 APZ42_015421 APZ42_015426 APZ42_015426 EOG090X06E3 EOG090X06E3 APZ42_013259 APZ42_013259 APZ42_012733 APZ42_012733 APZ42_012518 APZ42_012518 APZ42_007546 APZ42_007546 APZ42_001768 APZ42_001768 APZ42_001512 APZ42_001512 APZ42_001366 APZ42_001366 APZ42_000935 APZ42_000935 APZ42_034480 APZ42_034480 APZ42_034476 APZ42_034476 APZ42_033798 APZ42_033798 APZ42_033665 APZ42_033665 APZ42_033700 APZ42_033700 APZ42_033471 APZ42_033471 APZ42_032779 APZ42_032779 APZ42_032025 APZ42_032025 APZ42_031690 APZ42_031690 APZ42_031508 APZ42_031508 APZ42_031072 APZ42_031072 APZ42_030796 APZ42_030796 APZ42_030862 APZ42_030862 APZ42_030689 APZ42_030689 APZ42_029500 APZ42_029500 APZ42_029236 APZ42_029236 APZ42_028066 APZ42_028066 APZ42_027188 APZ42_027188 APZ42_027208 APZ42_027208 APZ42_026973 APZ42_026973 APZ42_026408 APZ42_026408 APZ42_026098 APZ42_026098 APZ42_026059 APZ42_026059 APZ42_025680 APZ42_025680 APZ42_025579 APZ42_025579 APZ42_024627 APZ42_024627 APZ42_024495 APZ42_024495 APZ42_023871 APZ42_023871 APZ42_023951 APZ42_023951 APZ42_022994 APZ42_022994 APZ42_022290 APZ42_022290 APZ42_022381 APZ42_022381 APZ42_022577 APZ42_022577 APZ42_022572 APZ42_022572 APZ42_022003 APZ42_022003 EOG090X09DZ EOG090X09DZ APZ42_021808 APZ42_021808 APZ42_021814 APZ42_021814 APZ42_020869 APZ42_020869 APZ42_019571 APZ42_019571 APZ42_019130 APZ42_019130 APZ42_018784 APZ42_018784 APZ42_018840 APZ42_018840 APZ42_018560 APZ42_018560 APZ42_017697 APZ42_017697 APZ42_017444 APZ42_017444 APZ42_017491 APZ42_017491 APZ42_016663 APZ42_016663 APZ42_016487 APZ42_016487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_028360Cell growth-regulating nucleolar protein. (267 aa)
APZ42_028281Nucleolar protein nop5. (516 aa)
APZ42_014295RNA helicase. (592 aa)
APZ42_032645Exosome complex component RRP43. (389 aa)
APZ42_014480DDB1-and CUL4-associated factor 13. (452 aa)
APZ42_033480Putative ATP-dependent RNA helicase DDX49. (660 aa)
APZ42_016909Colorectal mutant cancer protein. (984 aa)
EOG090X05X9U3 small nucleolar RNA-associated protein 15. (545 aa)
EOG090X07H9Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (474 aa)
APZ42_011608rRNA 2'-O-methyltransferase fibrillarin. (327 aa)
APZ42_028036ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (458 aa)
APZ42_026384RNA helicase. (863 aa)
APZ42_020224Ribosome production factor 2. (295 aa)
APZ42_025704Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (765 aa)
APZ42_023490ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family. (697 aa)
EOG090X058PCell adhesion complex protein bystin. (420 aa)
APZ42_026685Putative Ribosomal RNA processing protein 1. (148 aa)
APZ42_023764Exosome complex component CSL4. (212 aa)
APZ42_023314Exosome complex exonuclease RRP41. (246 aa)
APZ42_029822Putative Nucleolar MIF4G domain-containing protein. (837 aa)
EOG090X09DDExosome complex component RRP4. (292 aa)
EOG090X02QXNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (633 aa)
APZ42_012839RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1022 aa)
APZ42_017568Putative ATP-dependent RNA helicase DDX52. (581 aa)
APZ42_020653Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (356 aa)
APZ42_012184Nucleolar protein 14. (851 aa)
APZ42_017641RNA helicase. (600 aa)
EOG090X0IJONeuroguidin-A. (297 aa)
APZ42_022727Nucleolar protein 5A-like protein. (567 aa)
APZ42_022564Glutamate-rich WD repeat-containing protein. (471 aa)
APZ42_032181WD repeat-containing protein 46. (569 aa)
APZ42_024016U3 small nucleolar RNA-associated protein 4. (704 aa)
EOG090X0APJU3 small nucleolar ribonucleoprotein IMP3. (182 aa)
APZ42_033088Something about silencing protein 10. (504 aa)
APZ42_013624Nucleolar complex protein 2. (821 aa)
APZ42_012620Methyltransferase NSUN6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (462 aa)
APZ42_030956Nucleolar protein 6. (1199 aa)
APZ42_017520RNA helicase. (756 aa)
APZ42_027194Exosome component 10. (822 aa)
EOG090X05RMDigestive organ expansion factor. (783 aa)
APZ42_016064Exosome complex exonuclease MTR3. (288 aa)
APZ42_017731Protein ESF1. (729 aa)
APZ42_029158RNA-binding protein. (429 aa)
APZ42_018206MATH and LRR domain-containing protein. (280 aa)
APZ42_026499WD repeat-containing protein 3 variant. (955 aa)
APZ42_015390Putative MKI67 FHA domain-interacting nucleolar phosphoprotein. (403 aa)
APZ42_012848Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (473 aa)
APZ42_023838Ubiquinone biosynthesis protein COQ9, mitochondrial. (588 aa)
APZ42_012038U3 small nucleolar RNA-interacting protein. (458 aa)
APZ42_016660RNA-binding protein. (578 aa)
EOG090X0F8MProtein MAK16 homolog; Belongs to the MAK16 family. (293 aa)
EOG090X0EWC60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (181 aa)
EOG090X0BJARibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (240 aa)
APZ42_032634WD repeat-containing protein 43. (671 aa)
APZ42_019015U3 small nucleolar RNA-associated protein 18. (598 aa)
APZ42_013947Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (697 aa)
APZ42_030268Exosome complex component RRP43. (276 aa)
APZ42_011254Cohesin subunit SA-1-like protein. (493 aa)
APZ42_028034Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (129 aa)
APZ42_015018Suppressor of SWI4. (470 aa)
APZ42_008340Ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (52 aa)
APZ42_034378Transducin beta protein 3. (800 aa)
EOG090X05E6Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (593 aa)
EOG090X05X4RNA 3'-terminal phosphate cyclase-like protein. (383 aa)
APZ42_025148Uncharacterized protein. (193 aa)
APZ42_020761Ribosomal RNA small subunit methyltransferase NEP1. (132 aa)
APZ42_015737Myb-binding protein 1A. (1356 aa)
APZ42_015790Nucleolar complex protein 4. (530 aa)
APZ42_015883ATP-dependent RNA Helicase kurz. (1212 aa)
APZ42_015928Putative Ribosome biogenesis protein bms1. (1317 aa)
APZ42_016091Putative Nucleolar pre-ribosomal-associated protein 1. (1950 aa)
APZ42_014833Nucleolar protein 9. (609 aa)
EOG090X0CWAExosome complex component RRP42. (290 aa)
APZ42_015168Exosome complex exonuclease rrp46. (218 aa)
APZ42_015380tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (523 aa)
APZ42_015421Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (851 aa)
APZ42_015426Surfeit locus protein 6. (365 aa)
EOG090X06E3Putative Zinc finger protein. (352 aa)
APZ42_013259Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. (743 aa)
APZ42_012733ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (826 aa)
APZ42_012518CCAAT/enhancer-binding protein zeta. (1112 aa)
APZ42_00754640S ribosomal protein S9. (70 aa)
APZ42_001768Deoxynucleotidyltransferase terminal-interacting 2-like protein. (273 aa)
APZ42_001512Notchless protein 1. (318 aa)
APZ42_001366Superkiller viralicidic activity 2 2. (293 aa)
APZ42_000935Ribosome biogenesis protein BOP1. (150 aa)
APZ42_034480P21-activated protein kinase-interacting protein 1. (365 aa)
APZ42_034476Putative Dis3; Belongs to the RNR ribonuclease family. (1310 aa)
APZ42_033798Uncharacterized protein. (154 aa)
APZ42_033665Putative rRNA-processing protein EBP2. (328 aa)
APZ42_033700Putative U3 small nucleolar RNA-associated protein 14 A. (772 aa)
APZ42_033471Guanine nucleotide-binding protein 3. (591 aa)
APZ42_032779WD repeat-containing protein 36. (907 aa)
APZ42_032025Ribosome biogenesis protein WDR12. (214 aa)
APZ42_031690Proliferation-associated protein 2G4. (387 aa)
APZ42_031508Ribosome production factor 1. (336 aa)
APZ42_031072Guanine nucleotide-binding protein 1. (581 aa)
APZ42_030796RNA 3'-terminal phosphate cyclase-like protein. (350 aa)
APZ42_030862U3 small nucleolar ribonucleoprotein IMP4. (41 aa)
APZ42_030689Putative Activator of basal transcription 1. (228 aa)
APZ42_029500Superkiller viralicidic activity 2 2. (703 aa)
APZ42_029236Putative Ribosomal L1 domain-containing protein. (506 aa)
APZ42_028066Small subunit processome component 20. (2677 aa)
APZ42_027188Nucleolar protein 10. (712 aa)
APZ42_027208Nuclear nucleic acid-binding protein C1D. (169 aa)
APZ42_026973WD repeat-containing protein 75. (567 aa)
APZ42_026408Ribosomal RNA processing protein 36. (186 aa)
APZ42_02609860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (510 aa)
APZ42_026059KRR1 small subunit processome component. (265 aa)
APZ42_025680Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family. (958 aa)
APZ42_025579Integrase catalytic domain-containing protein. (1127 aa)
APZ42_024627rRNA-processing protein FCF1. (197 aa)
APZ42_024495Putative ATP-dependent RNA helicase DDX56. (561 aa)
APZ42_023871Pumilio domain-containing protein. (687 aa)
APZ42_023951HEAT repeat-containing protein 1. (2100 aa)
APZ42_022994Exosome complex component RRP40. (242 aa)
APZ42_022290WD repeat-containing protein 74. (370 aa)
APZ42_022381No child left behind. (493 aa)
APZ42_022577Ribosomal RNA-processing protein 7 A. (152 aa)
APZ42_022572Putative Ribosome biogenesis protein RLP24. (182 aa)
APZ42_022003Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (581 aa)
EOG090X09DZU3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (664 aa)
APZ42_021808Ribosome biogenesis protein BRX1. (345 aa)
APZ42_021814RRP15-like protein. (296 aa)
APZ42_020869Protein AATF. (561 aa)
APZ42_019571Putative RNA-binding protein 19. (849 aa)
APZ42_019130Putative Ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (356 aa)
APZ42_018784Protein RRP5. (1536 aa)
APZ42_018840Nucleolar complex protein 3. (804 aa)
APZ42_018560Putative Ribosomal RNA processing protein 1. (95 aa)
APZ42_017697Nucleic_acid_bd domain-containing protein. (659 aa)
APZ42_017444U3 small nucleolar RNA-associated protein 6. (616 aa)
APZ42_017491HRDC domain-containing protein. (512 aa)
APZ42_016663Large subunit GTPase 1. (680 aa)
APZ42_016487Periodic tryptophan protein 2. (925 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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