STRINGSTRING
APZ42_028360 APZ42_028360 APZ42_014295 APZ42_014295 APZ42_033480 APZ42_033480 EOG090X07H9 EOG090X07H9 APZ42_020224 APZ42_020224 APZ42_025704 APZ42_025704 APZ42_026685 APZ42_026685 EOG090X02QX EOG090X02QX APZ42_020653 APZ42_020653 APZ42_017641 APZ42_017641 APZ42_022564 APZ42_022564 APZ42_013624 APZ42_013624 APZ42_012620 APZ42_012620 APZ42_029158 APZ42_029158 APZ42_015390 APZ42_015390 APZ42_016660 APZ42_016660 EOG090X0F8M EOG090X0F8M EOG090X0EWC EOG090X0EWC EOG090X0BJA EOG090X0BJA APZ42_013947 APZ42_013947 APZ42_015018 APZ42_015018 APZ42_008340 APZ42_008340 EOG090X05E6 EOG090X05E6 APZ42_015380 APZ42_015380 APZ42_015421 APZ42_015421 APZ42_015426 APZ42_015426 EOG090X06E3 EOG090X06E3 APZ42_013259 APZ42_013259 APZ42_012518 APZ42_012518 APZ42_001512 APZ42_001512 APZ42_000935 APZ42_000935 APZ42_034480 APZ42_034480 APZ42_033798 APZ42_033798 APZ42_033665 APZ42_033665 APZ42_033471 APZ42_033471 APZ42_032025 APZ42_032025 APZ42_031690 APZ42_031690 APZ42_031508 APZ42_031508 APZ42_031072 APZ42_031072 APZ42_029236 APZ42_029236 APZ42_026098 APZ42_026098 APZ42_024495 APZ42_024495 APZ42_023871 APZ42_023871 APZ42_022290 APZ42_022290 APZ42_022381 APZ42_022381 APZ42_022572 APZ42_022572 APZ42_022003 APZ42_022003 APZ42_021808 APZ42_021808 APZ42_021814 APZ42_021814 APZ42_019130 APZ42_019130 APZ42_018840 APZ42_018840 APZ42_018560 APZ42_018560 APZ42_016663 APZ42_016663
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_028360Cell growth-regulating nucleolar protein. (267 aa)
APZ42_014295RNA helicase. (592 aa)
APZ42_033480Putative ATP-dependent RNA helicase DDX49. (660 aa)
EOG090X07H9Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (474 aa)
APZ42_020224Ribosome production factor 2. (295 aa)
APZ42_025704Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (765 aa)
APZ42_026685Putative Ribosomal RNA processing protein 1. (148 aa)
EOG090X02QXNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (633 aa)
APZ42_020653Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (356 aa)
APZ42_017641RNA helicase. (600 aa)
APZ42_022564Glutamate-rich WD repeat-containing protein. (471 aa)
APZ42_013624Nucleolar complex protein 2. (821 aa)
APZ42_012620Methyltransferase NSUN6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (462 aa)
APZ42_029158RNA-binding protein. (429 aa)
APZ42_015390Putative MKI67 FHA domain-interacting nucleolar phosphoprotein. (403 aa)
APZ42_016660RNA-binding protein. (578 aa)
EOG090X0F8MProtein MAK16 homolog; Belongs to the MAK16 family. (293 aa)
EOG090X0EWC60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (181 aa)
EOG090X0BJARibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (240 aa)
APZ42_013947Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (697 aa)
APZ42_015018Suppressor of SWI4. (470 aa)
APZ42_008340Ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (52 aa)
EOG090X05E6Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (593 aa)
APZ42_015380tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (523 aa)
APZ42_015421Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (851 aa)
APZ42_015426Surfeit locus protein 6. (365 aa)
EOG090X06E3Putative Zinc finger protein. (352 aa)
APZ42_013259Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. (743 aa)
APZ42_012518CCAAT/enhancer-binding protein zeta. (1112 aa)
APZ42_001512Notchless protein 1. (318 aa)
APZ42_000935Ribosome biogenesis protein BOP1. (150 aa)
APZ42_034480P21-activated protein kinase-interacting protein 1. (365 aa)
APZ42_033798Uncharacterized protein. (154 aa)
APZ42_033665Putative rRNA-processing protein EBP2. (328 aa)
APZ42_033471Guanine nucleotide-binding protein 3. (591 aa)
APZ42_032025Ribosome biogenesis protein WDR12. (214 aa)
APZ42_031690Proliferation-associated protein 2G4. (387 aa)
APZ42_031508Ribosome production factor 1. (336 aa)
APZ42_031072Guanine nucleotide-binding protein 1. (581 aa)
APZ42_029236Putative Ribosomal L1 domain-containing protein. (506 aa)
APZ42_02609860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (510 aa)
APZ42_024495Putative ATP-dependent RNA helicase DDX56. (561 aa)
APZ42_023871Pumilio domain-containing protein. (687 aa)
APZ42_022290WD repeat-containing protein 74. (370 aa)
APZ42_022381No child left behind. (493 aa)
APZ42_022572Putative Ribosome biogenesis protein RLP24. (182 aa)
APZ42_022003Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (581 aa)
APZ42_021808Ribosome biogenesis protein BRX1. (345 aa)
APZ42_021814RRP15-like protein. (296 aa)
APZ42_019130Putative Ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (356 aa)
APZ42_018840Nucleolar complex protein 3. (804 aa)
APZ42_018560Putative Ribosomal RNA processing protein 1. (95 aa)
APZ42_016663Large subunit GTPase 1. (680 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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