(6 nodes) Nuclear pore outer ring network (Daphnia magna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_023172	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (642 aa)
	APZ42_015305	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family. (363 aa)
	APZ42_022409	Nuclear pore complex protein Nup133. (1116 aa)
	EOG090X07N7	SEC13 protein; Belongs to the WD repeat SEC13 family. (311 aa)
	APZ42_014494	WD_REPEATS_REGION domain-containing protein. (202 aa)
	APZ42_030621	Nuclear pore complex protein Nup160. (1379 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_014494	APZ42_015305	A0A162PTB8	A0A0P5X6F0	WD_REPEATS_REGION domain-containing protein.	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	0.999
APZ42_014494	APZ42_022409	A0A162PTB8	A0A0P5YWY4	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein Nup133.	0.999
APZ42_014494	APZ42_023172	A0A162PTB8	A0A0N8CSH8	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
APZ42_014494	APZ42_030621	A0A162PTB8	A0A164NPS4	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein Nup160.	0.999
APZ42_014494	EOG090X07N7	A0A162PTB8	A0A162DGD4	WD_REPEATS_REGION domain-containing protein.	SEC13 protein; Belongs to the WD repeat SEC13 family.	0.999
APZ42_015305	APZ42_014494	A0A0P5X6F0	A0A162PTB8	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	WD_REPEATS_REGION domain-containing protein.	0.999
APZ42_015305	APZ42_022409	A0A0P5X6F0	A0A0P5YWY4	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	Nuclear pore complex protein Nup133.	0.999
APZ42_015305	APZ42_023172	A0A0P5X6F0	A0A0N8CSH8	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
APZ42_015305	APZ42_030621	A0A0P5X6F0	A0A164NPS4	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	Nuclear pore complex protein Nup160.	0.995
APZ42_015305	EOG090X07N7	A0A0P5X6F0	A0A162DGD4	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	SEC13 protein; Belongs to the WD repeat SEC13 family.	0.999
APZ42_022409	APZ42_014494	A0A0P5YWY4	A0A162PTB8	Nuclear pore complex protein Nup133.	WD_REPEATS_REGION domain-containing protein.	0.999
APZ42_022409	APZ42_015305	A0A0P5YWY4	A0A0P5X6F0	Nuclear pore complex protein Nup133.	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	0.999
APZ42_022409	APZ42_023172	A0A0P5YWY4	A0A0N8CSH8	Nuclear pore complex protein Nup133.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
APZ42_022409	APZ42_030621	A0A0P5YWY4	A0A164NPS4	Nuclear pore complex protein Nup133.	Nuclear pore complex protein Nup160.	0.999
APZ42_022409	EOG090X07N7	A0A0P5YWY4	A0A162DGD4	Nuclear pore complex protein Nup133.	SEC13 protein; Belongs to the WD repeat SEC13 family.	0.999
APZ42_023172	APZ42_014494	A0A0N8CSH8	A0A162PTB8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	WD_REPEATS_REGION domain-containing protein.	0.999
APZ42_023172	APZ42_015305	A0A0N8CSH8	A0A0P5X6F0	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	0.999
APZ42_023172	APZ42_022409	A0A0N8CSH8	A0A0P5YWY4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup133.	0.999
APZ42_023172	APZ42_030621	A0A0N8CSH8	A0A164NPS4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup160.	0.999
APZ42_023172	EOG090X07N7	A0A0N8CSH8	A0A162DGD4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	SEC13 protein; Belongs to the WD repeat SEC13 family.	0.999