(15 nodes) Transcription coregulator binding network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_018393	AT-rich interactive domain-containing 4B-like protein. (1711 aa)
	APZ42_018366	Uncharacterized protein. (625 aa)
	APZ42_019569	Serine/threonine-protein kinase MRCK beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2003 aa)
	APZ42_021313	Transcriptional enhancer factor TEF-1. (365 aa)
	APZ42_021465	Putative Transcriptional enhancer factor TEF-1. (173 aa)
	APZ42_024654	Putative Transcriptional factor Homothorax protein. (285 aa)
	APZ42_027344	Uncharacterized protein. (1400 aa)
	EOG090X020Y	PR domain zinc finger 12-like protein. (875 aa)
	APZ42_029890	Period circadian protein. (1288 aa)
	APZ42_030076	ATP-dependent Helicase brm. (1476 aa)
	APZ42_031138	Uncharacterized protein. (315 aa)
	EOG090X0JP1	Transcription elongation factor B polypeptide 2. (120 aa)
	APZ42_032570	Nuclear receptor subfamily 2 group E member. (477 aa)
	APZ42_019872	Transcription cofactor vestigial 4-like protein. (323 aa)
	APZ42_011336	C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (475 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011336	APZ42_018366	A0A0P5E3C9	A0A164Z5Q8	C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein.	0.893
APZ42_018366	APZ42_011336	A0A164Z5Q8	A0A0P5E3C9	Uncharacterized protein.	C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.893
APZ42_018366	APZ42_021313	A0A164Z5Q8	A0A164WSR1	Uncharacterized protein.	Transcriptional enhancer factor TEF-1.	0.628
APZ42_018366	APZ42_021465	A0A164Z5Q8	A0A164WMY1	Uncharacterized protein.	Putative Transcriptional enhancer factor TEF-1.	0.628
APZ42_018366	APZ42_030076	A0A164Z5Q8	A0A164P2K5	Uncharacterized protein.	ATP-dependent Helicase brm.	0.524
APZ42_018393	APZ42_030076	A0A164Z666	A0A164P2K5	AT-rich interactive domain-containing 4B-like protein.	ATP-dependent Helicase brm.	0.715
APZ42_019872	APZ42_021313	A0A0P5ZCE4	A0A164WSR1	Transcription cofactor vestigial 4-like protein.	Transcriptional enhancer factor TEF-1.	0.911
APZ42_019872	APZ42_021465	A0A0P5ZCE4	A0A164WMY1	Transcription cofactor vestigial 4-like protein.	Putative Transcriptional enhancer factor TEF-1.	0.911
APZ42_021313	APZ42_018366	A0A164WSR1	A0A164Z5Q8	Transcriptional enhancer factor TEF-1.	Uncharacterized protein.	0.628
APZ42_021313	APZ42_019872	A0A164WSR1	A0A0P5ZCE4	Transcriptional enhancer factor TEF-1.	Transcription cofactor vestigial 4-like protein.	0.911
APZ42_021465	APZ42_018366	A0A164WMY1	A0A164Z5Q8	Putative Transcriptional enhancer factor TEF-1.	Uncharacterized protein.	0.628
APZ42_021465	APZ42_019872	A0A164WMY1	A0A0P5ZCE4	Putative Transcriptional enhancer factor TEF-1.	Transcription cofactor vestigial 4-like protein.	0.911
APZ42_027344	APZ42_030076	A0A164RI89	A0A164P2K5	Uncharacterized protein.	ATP-dependent Helicase brm.	0.569
APZ42_027344	APZ42_031138	A0A164RI89	A0A164N356	Uncharacterized protein.	Uncharacterized protein.	0.611
APZ42_029890	APZ42_031138	A0A164P844	A0A164N356	Period circadian protein.	Uncharacterized protein.	0.810
APZ42_030076	APZ42_018366	A0A164P2K5	A0A164Z5Q8	ATP-dependent Helicase brm.	Uncharacterized protein.	0.524
APZ42_030076	APZ42_018393	A0A164P2K5	A0A164Z666	ATP-dependent Helicase brm.	AT-rich interactive domain-containing 4B-like protein.	0.715
APZ42_030076	APZ42_027344	A0A164P2K5	A0A164RI89	ATP-dependent Helicase brm.	Uncharacterized protein.	0.569
APZ42_030076	APZ42_032570	A0A164P2K5	A0A0P6GDD9	ATP-dependent Helicase brm.	Nuclear receptor subfamily 2 group E member.	0.569
APZ42_030076	EOG090X0JP1	A0A164P2K5	A0A162RIY9	ATP-dependent Helicase brm.	Transcription elongation factor B polypeptide 2.	0.597