(15 nodes) Ribonuclease III activity network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_013172	Putative Endoribonuclease Dicer. (1852 aa)
	APZ42_010131	Uncharacterized protein. (96 aa)
	APZ42_020395	Helicase ATP-binding domain-containing protein. (289 aa)
	APZ42_020410	Ribonuclease 3. (1155 aa)
	APZ42_022331	Interferon-induced helicase C domain-containing 1-like protein; Belongs to the helicase family. Dicer subfamily. (722 aa)
	APZ42_025393	Endoribonuclease Dcr-1. (1807 aa)
	APZ42_031177	Helicase ATP-binding domain-containing protein. (696 aa)
	APZ42_009973	Uncharacterized protein. (145 aa)
	APZ42_009511	Dicer dsRNA-binding fold domain-containing protein. (310 aa)
	APZ42_009219	Dicer dsRNA-binding fold domain-containing protein. (208 aa)
	APZ42_002652	Putative Endoribonuclease Dcr-1. (263 aa)
	APZ42_000786	RNase III domain-containing protein. (197 aa)
	APZ42_032147	Uncharacterized protein. (625 aa)
	APZ42_008024	Putative Endoribonuclease dcr-1. (135 aa)
	APZ42_005377	PAZ domain-containing protein. (80 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000786	APZ42_022331	A0A164JDQ5	A0A164VFB2	RNase III domain-containing protein.	Interferon-induced helicase C domain-containing 1-like protein; Belongs to the helicase family. Dicer subfamily.	0.612
APZ42_000786	APZ42_032147	A0A164JDQ5	A0A164M6R7	RNase III domain-containing protein.	Uncharacterized protein.	0.598
APZ42_002652	APZ42_008024	A0A164I4P4	A0A162D172	Putative Endoribonuclease Dcr-1.	Putative Endoribonuclease dcr-1.	0.429
APZ42_005377	APZ42_009219	A0A162D565	A0A164E578	PAZ domain-containing protein.	Dicer dsRNA-binding fold domain-containing protein.	0.403
APZ42_005377	APZ42_009511	A0A162D565	A0A164DYT8	PAZ domain-containing protein.	Dicer dsRNA-binding fold domain-containing protein.	0.405
APZ42_008024	APZ42_002652	A0A162D172	A0A164I4P4	Putative Endoribonuclease dcr-1.	Putative Endoribonuclease Dcr-1.	0.429
APZ42_009219	APZ42_005377	A0A164E578	A0A162D565	Dicer dsRNA-binding fold domain-containing protein.	PAZ domain-containing protein.	0.403
APZ42_009511	APZ42_005377	A0A164DYT8	A0A162D565	Dicer dsRNA-binding fold domain-containing protein.	PAZ domain-containing protein.	0.405
APZ42_013172	APZ42_020395	A0A162R374	A0A164XIZ1	Putative Endoribonuclease Dicer.	Helicase ATP-binding domain-containing protein.	0.899
APZ42_020395	APZ42_013172	A0A164XIZ1	A0A162R374	Helicase ATP-binding domain-containing protein.	Putative Endoribonuclease Dicer.	0.899
APZ42_020395	APZ42_025393	A0A164XIZ1	A0A164T4F3	Helicase ATP-binding domain-containing protein.	Endoribonuclease Dcr-1.	0.544
APZ42_022331	APZ42_000786	A0A164VFB2	A0A164JDQ5	Interferon-induced helicase C domain-containing 1-like protein; Belongs to the helicase family. Dicer subfamily.	RNase III domain-containing protein.	0.612
APZ42_025393	APZ42_020395	A0A164T4F3	A0A164XIZ1	Endoribonuclease Dcr-1.	Helicase ATP-binding domain-containing protein.	0.544
APZ42_032147	APZ42_000786	A0A164M6R7	A0A164JDQ5	Uncharacterized protein.	RNase III domain-containing protein.	0.598