STRINGSTRING
APZ42_017968 APZ42_017968 APZ42_026784 APZ42_026784 APZ42_027043 APZ42_027043 APZ42_028709 APZ42_028709 APZ42_022929 APZ42_022929 APZ42_022946 APZ42_022946 Fen1 Fen1 APZ42_020348 APZ42_020348 APZ42_022415 APZ42_022415 EOG090X080R EOG090X080R APZ42_034386 APZ42_034386 APZ42_018555 APZ42_018555 APZ42_019081 APZ42_019081 APZ42_006476 APZ42_006476 APZ42_008024 APZ42_008024 APZ42_023543 APZ42_023543 APZ42_015428 APZ42_015428 APZ42_017911 APZ42_017911 APZ42_027142 APZ42_027142 APZ42_013589 APZ42_013589 APZ42_030791 APZ42_030791 APZ42_031022 APZ42_031022 APZ42_031251 APZ42_031251 APZ42_032147 APZ42_032147 APZ42_000786 APZ42_000786 APZ42_001217 APZ42_001217 APZ42_002652 APZ42_002652 APZ42_003027 APZ42_003027 APZ42_023016 APZ42_023016 APZ42_023548 APZ42_023548 APZ42_024123 APZ42_024123 APZ42_024555 APZ42_024555 APZ42_024502 APZ42_024502 APZ42_025393 APZ42_025393 APZ42_026868 APZ42_026868 APZ42_027051 APZ42_027051 APZ42_027291 APZ42_027291 APZ42_027841 APZ42_027841 APZ42_028330 APZ42_028330 APZ42_003050 APZ42_003050 APZ42_003517 APZ42_003517 APZ42_004214 APZ42_004214 APZ42_009219 APZ42_009219 APZ42_009511 APZ42_009511 APZ42_010116 APZ42_010116 APZ42_013054 APZ42_013054 APZ42_015463 APZ42_015463 APZ42_022331 APZ42_022331 APZ42_022527 APZ42_022527 APZ42_021851 APZ42_021851 APZ42_001557 APZ42_001557 APZ42_012372 APZ42_012372 APZ42_020612 APZ42_020612 APZ42_020395 APZ42_020395 APZ42_019233 APZ42_019233 APZ42_018561 APZ42_018561 APZ42_018267 APZ42_018267 APZ42_018101 APZ42_018101
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_017968DRMBL domain-containing protein. (493 aa)
APZ42_026784Three prime repair exonuclease. (243 aa)
APZ42_027043Deoxyribonuclease i. (770 aa)
APZ42_028709Meiosis-specific with OB domain-containing protein. (462 aa)
APZ42_022929DNA polymerase. (1088 aa)
APZ42_022946DNAation factor subunit beta. (328 aa)
Fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (381 aa)
APZ42_020348Putative Exonuclease 1. (664 aa)
APZ42_022415DNA cross-link repair 1A protein. (824 aa)
EOG090X080RTat-linked quality control protein TatD. (318 aa)
APZ42_034386Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (703 aa)
APZ42_018555Dna-repair complementing xp-g cells-like protein. (183 aa)
APZ42_019081Endonuclease. (254 aa)
APZ42_006476Reverse transcriptase domain-containing protein. (107 aa)
APZ42_008024Putative Endoribonuclease dcr-1. (135 aa)
APZ42_023543Endonuclease_NS domain-containing protein. (403 aa)
APZ42_015428Endonuclease_NS domain-containing protein. (411 aa)
APZ42_01791160S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
APZ42_027142Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family. (432 aa)
APZ42_013589DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2240 aa)
APZ42_030791DNA repair Endonuclease XPF. (753 aa)
APZ42_031022Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (261 aa)
APZ42_031251Uncharacterized protein. (546 aa)
APZ42_032147Uncharacterized protein. (625 aa)
APZ42_000786RNase III domain-containing protein. (197 aa)
APZ42_001217Exonuclease domain-containing protein. (151 aa)
APZ42_002652Putative Endoribonuclease Dcr-1. (263 aa)
APZ42_003027Reverse transcriptase domain-containing protein. (144 aa)
APZ42_023016Phospholipase D3. (510 aa)
APZ42_023548Uncharacterized protein. (527 aa)
APZ42_024123Uncharacterized protein. (99 aa)
APZ42_024555DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (413 aa)
APZ42_024502Exonuclease 3'-5' domain-containing protein 2; Belongs to the nanos family. (773 aa)
APZ42_025393Endoribonuclease Dcr-1. (1807 aa)
APZ42_026868Deoxyribonuclease II. (312 aa)
APZ42_027051Uncharacterized protein. (410 aa)
APZ42_027291DNA polymerase. (1463 aa)
APZ42_027841Uncharacterized protein. (501 aa)
APZ42_028330Putative Ankyrin repeat and LEM domain-containing protein 1. (540 aa)
APZ42_003050Uncharacterized protein. (113 aa)
APZ42_003517Uncharacterized protein. (136 aa)
APZ42_004214Reverse transcriptase domain-containing protein. (151 aa)
APZ42_009219Dicer dsRNA-binding fold domain-containing protein. (208 aa)
APZ42_009511Dicer dsRNA-binding fold domain-containing protein. (310 aa)
APZ42_010116Reverse transcriptase domain-containing protein. (103 aa)
APZ42_013054DNA polymerase subunit gamma-1, mitochondrial. (1188 aa)
APZ42_015463Crossover junction endonuclease MUS81. (636 aa)
APZ42_022331Interferon-induced helicase C domain-containing 1-like protein; Belongs to the helicase family. Dicer subfamily. (722 aa)
APZ42_022527Endonuclease 4. (487 aa)
APZ42_021851Putative Flap endonuclease GEN. (654 aa)
APZ42_001557DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (327 aa)
APZ42_012372Putative DNA cross-link repair protein pso2/snm1. (385 aa)
APZ42_020612DNA replication ATP-dependent helicase/nuclease DNA2. (765 aa)
APZ42_020395Helicase ATP-binding domain-containing protein. (289 aa)
APZ42_019233NEDD4-binding 2 2-like protein. (1023 aa)
APZ42_018561DNA repair complementing XP-G cells-like protein. (685 aa)
APZ42_018267Reverse transcriptase domain-containing protein. (335 aa)
APZ42_018101Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (924 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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