(13 nodes) Aging network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_023200	Putative Sestrin-1. (277 aa)
	APZ42_020472	Apoptosis regulator BAX. (210 aa)
	APZ42_028391	Transcription factor AP-1. (291 aa)
	EOG090X08JU	Nuclear factor interleukin-3-regulated protein. (797 aa)
	APZ42_019458	Putative Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
	APZ42_026829	Lipocln_cytosolic_FA-bd_dom domain-containing protein. (128 aa)
	APZ42_017689	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (200 aa)
	APZ42_001855	Sestrin. (388 aa)
	APZ42_030483	Arrestin domain-containing protein 2. (345 aa)
	APZ42_023915	Uncharacterized protein. (938 aa)
	APZ42_016447	Insulin receptor substrate 1-like protein. (1672 aa)
	APZ42_016912	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (193 aa)
	APZ42_016927	Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family. (226 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001855	APZ42_023200	A0A164IPH2	A0A164V4Z3	Sestrin.	Putative Sestrin-1.	0.633
APZ42_016447	APZ42_028391	A0A165AFH6	A0A0P5N418	Insulin receptor substrate 1-like protein.	Transcription factor AP-1.	0.615
APZ42_020472	EOG090X08JU	A0A0P4XHJ8	A0A0P5VMA0	Apoptosis regulator BAX.	Nuclear factor interleukin-3-regulated protein.	0.577
APZ42_023200	APZ42_001855	A0A164V4Z3	A0A164IPH2	Putative Sestrin-1.	Sestrin.	0.633
APZ42_028391	APZ42_016447	A0A0P5N418	A0A165AFH6	Transcription factor AP-1.	Insulin receptor substrate 1-like protein.	0.615
EOG090X08JU	APZ42_020472	A0A0P5VMA0	A0A0P4XHJ8	Nuclear factor interleukin-3-regulated protein.	Apoptosis regulator BAX.	0.577