(18 nodes) Photoreceptor cell morphogenesis network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_032447	Putative Basigin. (359 aa)
	APZ42_002074	Partitioning defective. (259 aa)
	APZ42_026442	Protein crumbs. (2334 aa)
	APZ42_016059	Hindsight transcription factor-like protein. (1512 aa)
	APZ42_014859	Uncharacterized protein. (307 aa)
	APZ42_015048	Putative Serine/threonine-protein kinase/endoribonuclease IRE2. (406 aa)
	APZ42_013305	Liprin-alpha. (1255 aa)
	APZ42_012055	Putative Transcriptional factor Ocelliless/Orthodenticle protein. (494 aa)
	APZ42_011247	Serine/threonine-protein kinase/endoribonuclease IRE2. (1597 aa)
	APZ42_011068	Microtubule-associated protein. (298 aa)
	APZ42_007877	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (252 aa)
	APZ42_006353	Protein kinase domain-containing protein. (398 aa)
	APZ42_029513	Serine/threonine-protein kinase/endoribonuclease IRE2. (479 aa)
	APZ42_026391	Tyrosine-protein phosphatase Lar. (1106 aa)
	APZ42_023352	Tyrosine-protein phosphatase Lar. (544 aa)
	APZ42_023091	Putative Mitogen-activated protein kinase kinase kinase kinase 4. (1001 aa)
	APZ42_021977	Putative Partitioning-defective 3 protein B. (609 aa)
	APZ42_016618	Mitogen-activated protein kinase kinase kinase kinase 4. (435 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002074	APZ42_026442	A0A162C620	A0A162EDC0	Partitioning defective.	Protein crumbs.	0.552
APZ42_006353	APZ42_011068	A0A164FYA3	A0A162T6H4	Protein kinase domain-containing protein.	Microtubule-associated protein.	0.553
APZ42_007877	APZ42_011068	A0A164F143	A0A162T6H4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Microtubule-associated protein.	0.553
APZ42_011068	APZ42_006353	A0A162T6H4	A0A164FYA3	Microtubule-associated protein.	Protein kinase domain-containing protein.	0.553
APZ42_011068	APZ42_007877	A0A162T6H4	A0A164F143	Microtubule-associated protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.553
APZ42_011068	APZ42_011247	A0A162T6H4	A0A162SIB8	Microtubule-associated protein.	Serine/threonine-protein kinase/endoribonuclease IRE2.	0.553
APZ42_011068	APZ42_015048	A0A162T6H4	A0A162P4Q8	Microtubule-associated protein.	Putative Serine/threonine-protein kinase/endoribonuclease IRE2.	0.553
APZ42_011068	APZ42_029513	A0A162T6H4	A0A164PM62	Microtubule-associated protein.	Serine/threonine-protein kinase/endoribonuclease IRE2.	0.553
APZ42_011068	APZ42_032447	A0A162T6H4	A0A0P5M2P7	Microtubule-associated protein.	Putative Basigin.	0.450
APZ42_011247	APZ42_011068	A0A162SIB8	A0A162T6H4	Serine/threonine-protein kinase/endoribonuclease IRE2.	Microtubule-associated protein.	0.553
APZ42_013305	APZ42_023352	A0A162QW26	A0A164V102	Liprin-alpha.	Tyrosine-protein phosphatase Lar.	0.621
APZ42_013305	APZ42_026391	A0A162QW26	A0A164S6S9	Liprin-alpha.	Tyrosine-protein phosphatase Lar.	0.621
APZ42_015048	APZ42_011068	A0A162P4Q8	A0A162T6H4	Putative Serine/threonine-protein kinase/endoribonuclease IRE2.	Microtubule-associated protein.	0.553
APZ42_016618	APZ42_023091	A0A165ABY6	A0A164V6S8	Mitogen-activated protein kinase kinase kinase kinase 4.	Putative Mitogen-activated protein kinase kinase kinase kinase 4.	0.900
APZ42_021977	APZ42_026391	A0A164W6R4	A0A164S6S9	Putative Partitioning-defective 3 protein B.	Tyrosine-protein phosphatase Lar.	0.411
APZ42_021977	APZ42_026442	A0A164W6R4	A0A162EDC0	Putative Partitioning-defective 3 protein B.	Protein crumbs.	0.552
APZ42_023091	APZ42_016618	A0A164V6S8	A0A165ABY6	Putative Mitogen-activated protein kinase kinase kinase kinase 4.	Mitogen-activated protein kinase kinase kinase kinase 4.	0.900
APZ42_023352	APZ42_013305	A0A164V102	A0A162QW26	Tyrosine-protein phosphatase Lar.	Liprin-alpha.	0.621
APZ42_026391	APZ42_013305	A0A164S6S9	A0A162QW26	Tyrosine-protein phosphatase Lar.	Liprin-alpha.	0.621
APZ42_026391	APZ42_021977	A0A164S6S9	A0A164W6R4	Tyrosine-protein phosphatase Lar.	Putative Partitioning-defective 3 protein B.	0.411