STRINGSTRING
APZ42_022461 APZ42_022461 APZ42_023975 APZ42_023975 APZ42_028634 APZ42_028634 APZ42_028635 APZ42_028635 APZ42_028571 APZ42_028571 APZ42_011331 APZ42_011331 APZ42_015190 APZ42_015190 APZ42_030266 APZ42_030266 APZ42_016157 APZ42_016157 APZ42_015545 APZ42_015545 APZ42_023765 APZ42_023765 APZ42_019859 APZ42_019859 EOG090X0O5J EOG090X0O5J APZ42_034125 APZ42_034125 APZ42_016143 APZ42_016143 APZ42_020472 APZ42_020472 EOG090X01A3 EOG090X01A3 APZ42_019439 APZ42_019439
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_022461Cyclin F box-like protein 7. (479 aa)
APZ42_023975E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (409 aa)
APZ42_028634AarF domain-containing protein kinase 1. (508 aa)
APZ42_028635AarF domain-containing protein kinase 1. (509 aa)
APZ42_028571Activating molecule in BECN1-regulated autophagy 1-like protein. (1394 aa)
APZ42_011331LA-related protein 1. (1144 aa)
APZ42_015190Putative Huntingtin. (2896 aa)
APZ42_030266Serine/threonine-protein phosphatase PGAM5, mitochondrial. (279 aa)
APZ42_016157UPF0389 protein. (127 aa)
APZ42_015545Dynamin-1 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (737 aa)
APZ42_023765Mitochondrial ubiquitin ligase activator of nfkb 1-A. (381 aa)
APZ42_019859Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (700 aa)
EOG090X0O5JSingle-stranded DNA-binding protein, mitochondrial. (166 aa)
APZ42_034125A-kinase anchor protein 1, mitochondrial. (496 aa)
APZ42_016143Growth and transformation-dependent protein. (129 aa)
APZ42_020472Apoptosis regulator BAX. (210 aa)
EOG090X01A3Transmembrane GTPase Marf; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (760 aa)
APZ42_019439Optic atrophy 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (978 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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