STRINGSTRING
APZ42_023975 APZ42_023975 APZ42_020472 APZ42_020472 APZ42_019485 APZ42_019485 APZ42_030800 APZ42_030800 APZ42_029399 APZ42_029399 APZ42_013393 APZ42_013393 APZ42_012213 APZ42_012213 APZ42_001636 APZ42_001636 APZ42_033652 APZ42_033652 APZ42_028635 APZ42_028635 APZ42_028634 APZ42_028634
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_023975E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (409 aa)
APZ42_020472Apoptosis regulator BAX. (210 aa)
APZ42_019485Putative Inversin. (3235 aa)
APZ42_030800Metalloendopeptidase OMA1, mitochondrial. (417 aa)
APZ42_029399Synaptic vesicle membrane protein VAT-1. (345 aa)
APZ42_013393Solute carrier family 35 member F6. (381 aa)
APZ42_012213Vasopressin neuropeptide preprohormone-like protein. (150 aa)
APZ42_001636Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (75 aa)
APZ42_033652Growth hormone-inducible transmembrane protein; Belongs to the BI1 family. (337 aa)
APZ42_028635AarF domain-containing protein kinase 1. (509 aa)
APZ42_028634AarF domain-containing protein kinase 1. (508 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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