(27 nodes) Neuroblast differentiation network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_011470	Putative Transcription factor prospero. (962 aa)
	APZ42_027608	Protein numb. (531 aa)
	APZ42_010983	Homeobox unplugged-like protein. (496 aa)
	APZ42_032570	Nuclear receptor subfamily 2 group E member. (477 aa)
	APZ42_011474	TM2 domain-containing protein almondex. (211 aa)
	APZ42_025637	Transcription factor castor-like protein. (1619 aa)
	APZ42_025136	Delta-like protein. (148 aa)
	APZ42_014841	Cyclin E-like protein; Belongs to the cyclin family. (458 aa)
	APZ42_016998	BHLH domain-containing protein. (406 aa)
	APZ42_016999	Achaete-scute complex protein T3. (291 aa)
	APZ42_020324	Putative Transcription factor HES-2. (590 aa)
	APZ42_021910	Steroid receptor seven-up. (262 aa)
	APZ42_023386	Putative Daughterless protein. (68 aa)
	APZ42_027344	Uncharacterized protein. (1400 aa)
	APZ42_029243	Uncharacterized protein. (1185 aa)
	APZ42_029508	Decaprenyl-diphosphate synthase subunit; Belongs to the FPP/GGPP synthase family. (390 aa)
	APZ42_030990	Disintegrin and metalloproteinase domain-containing protein. (912 aa)
	APZ42_031073	Putative Double-stranded RNA-binding protein Staufen. (542 aa)
	APZ42_032936	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (646 aa)
	APZ42_002871	Uncharacterized protein. (135 aa)
	APZ42_028796	Geranylgeranyl pyrophosphate synthase/polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (314 aa)
	APZ42_017603	AT-rich interactive domain-containing protein 1A. (2316 aa)
	APZ42_015091	E3 ubiquitin-protein ligase NEURL1B. (628 aa)
	APZ42_029507	Geranylgeranyl pyrophosphate synthase/polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (390 aa)
	APZ42_022070	Zinc finger and SCAN domain-containing protein. (776 aa)
	APZ42_033221	Putative Homeotic Antennapedia protein. (627 aa)
	APZ42_031773	Neurogenic protein mastermind. (1345 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002871	APZ42_016998	A0A164HZG8	A0A165AA93	Uncharacterized protein.	BHLH domain-containing protein.	0.858
APZ42_002871	APZ42_016999	A0A164HZG8	A0A165AA79	Uncharacterized protein.	Achaete-scute complex protein T3.	0.858
APZ42_015091	APZ42_025136	A0A0P5BF04	A0A162DDU3	E3 ubiquitin-protein ligase NEURL1B.	Delta-like protein.	0.631
APZ42_015091	APZ42_027608	A0A0P5BF04	A0A0P5ZRL2	E3 ubiquitin-protein ligase NEURL1B.	Protein numb.	0.561
APZ42_015091	APZ42_032936	A0A0P5BF04	A0A164LJ80	E3 ubiquitin-protein ligase NEURL1B.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.631
APZ42_016998	APZ42_002871	A0A165AA93	A0A164HZG8	BHLH domain-containing protein.	Uncharacterized protein.	0.858
APZ42_016998	APZ42_020324	A0A165AA93	A0A164XLU9	BHLH domain-containing protein.	Putative Transcription factor HES-2.	0.551
APZ42_016998	APZ42_023386	A0A165AA93	A0A164UZQ6	BHLH domain-containing protein.	Putative Daughterless protein.	0.858
APZ42_016999	APZ42_002871	A0A165AA79	A0A164HZG8	Achaete-scute complex protein T3.	Uncharacterized protein.	0.858
APZ42_016999	APZ42_020324	A0A165AA79	A0A164XLU9	Achaete-scute complex protein T3.	Putative Transcription factor HES-2.	0.551
APZ42_016999	APZ42_023386	A0A165AA79	A0A164UZQ6	Achaete-scute complex protein T3.	Putative Daughterless protein.	0.858
APZ42_017603	APZ42_021910	A0A0N8DAM1	A0A164W8J8	AT-rich interactive domain-containing protein 1A.	Steroid receptor seven-up.	0.578
APZ42_017603	APZ42_027344	A0A0N8DAM1	A0A164RI89	AT-rich interactive domain-containing protein 1A.	Uncharacterized protein.	0.578
APZ42_017603	APZ42_032570	A0A0N8DAM1	A0A0P6GDD9	AT-rich interactive domain-containing protein 1A.	Nuclear receptor subfamily 2 group E member.	0.578
APZ42_020324	APZ42_016998	A0A164XLU9	A0A165AA93	Putative Transcription factor HES-2.	BHLH domain-containing protein.	0.551
APZ42_020324	APZ42_016999	A0A164XLU9	A0A165AA79	Putative Transcription factor HES-2.	Achaete-scute complex protein T3.	0.551
APZ42_020324	APZ42_022070	A0A164XLU9	A0A0P5UZ61	Putative Transcription factor HES-2.	Zinc finger and SCAN domain-containing protein.	0.400
APZ42_021910	APZ42_017603	A0A164W8J8	A0A0N8DAM1	Steroid receptor seven-up.	AT-rich interactive domain-containing protein 1A.	0.578
APZ42_022070	APZ42_020324	A0A0P5UZ61	A0A164XLU9	Zinc finger and SCAN domain-containing protein.	Putative Transcription factor HES-2.	0.400
APZ42_023386	APZ42_016998	A0A164UZQ6	A0A165AA93	Putative Daughterless protein.	BHLH domain-containing protein.	0.858